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Protein Overview: gi|113578967, gi...

General Information:
Name(s) found: gi|115463633 [NCBI NR]
gi|113578967 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 1086 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDASSDLGG ARPGAVERDI EQAITALKKG AYLLKYGRRG KPKFCPFRLS NDESILIWFS  60
   61 GKEEKQLRLS HVSRIIPGQR TAIFQRYPRP EKECQSFSLI SHDRSLDIIC KDKDEAEVWF 120
  121 AGLKTLITRS HQRKWRTESR SDMLSSGTTS PRTYTRRSSP LSSPFSSNDS VHKDGVENYR 180
  181 LRSPFGSPPK VGLEKAFSDI VSYAAPPKPF FPSDSNAGSV HSVSSGQSDN TNLHSRGIPM 240
  241 DAFRVSLSSA VSSSSHGSGH DDGDALGDVF IWGEGTGEGI LGGGNSRVGN SSGVNMDCLI 300
  301 PKPLEFAVKL DVQNISCGGR HATLVTKQGE IYSWGEESGG RLGHGVDCDV PQPKLIDALA 360
  361 NMNIELVACG EYHTCAVTLS GDLYTWGNGT SNSGLLGHGN EVSHWVPKRV NGPLEGIHVS 420
  421 AISCGPWHTA IVTSAGQLFT FGDGSFGVLG HGDRQSLSVP REVESLKGLR TVRAACGVWH 480
  481 TAAVVEVMVG NSSSSNCSSG KIFTWGDGDK GRLGHGDKDT RLVPTCVAAL VEPNFCQIAC 540
  541 GHCMTVALTT SGHVYTMGSP VYGQLGNPQA DGMLPVRVEG KLHKNFVEEI SCGAYHVAVL 600
  601 TSRTEVYTWG KGANGRLGHG DTDDRSSPTL VEALKDKQVR TVVCGINFTA AICIHKWVSG 660
  661 VDQSMCSGCR LPFNLRRKRH NCYNCALVFC HACSSKKSLK ASLAPNPNKP YRVCDSCYSK 720
  721 LNKGPETDRY SSAKRGSVIQ GFNDSVDEEL ETKSNAQLSR LSSLESFKHM DSRTSKKNKK 780
  781 FEFNSSRVSP IPNGSSHWSG LNISKSFGSS KKFFSASVPG SRIVSRATSP VSRRASPPRS 840
  841 TTPTPTLGGL TSPRVVDGVK PNDSISQEVL SLRSQVENLT RKSQLLEADL ERTTKQLKEA 900
  901 ISIAGEETAK CKAAKEVIKS LTAQLKGMAE KLPEGAGLVK NSRLPPLPGI SIPTDISVAS 960
  961 ESLGSPRSSG EPCSNGSNGL LVSNGPTSVR NKLSHPEIPK NGTRLPDSDS KHESEWVEQD1020
 1021 EPGVYITLTA LPGGTRDLKR VRFSRKRFSE TQAEQWWQEN RARVYEQYNV RVVDKSVGSI1080
 1081 DNDVHH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..163] PSI-BLAST 4.154902 STRUCTURE OF THE PLECKSTRIN HOMOLOGY DOMAIN FROM PHOSPHOLIPASE C DELTA IN COMPLEX WITH INOSITOL TRISPHOSPHATE
    2 View Details [164..245] deduced N/A No confident structure predictions are available.
    3 View Details [246..722] PSI-BLAST 84.30103 Regulator of chromosome condensation RCC1
    4 View Details [723..777] deduced N/A No confident structure predictions are available.
    5 View Details [778..1086] PSI-BLAST 8.69897 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle