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Protein Overview: gi|215697237, gi...

General Information:
Name(s) found: gi|215697237 [NCBI NR]
gi|115462619 [NCBI NR]
gi|113578460 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|215697237|dbj|BAG91231.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115462619|ref|NP_001054909.1| Os05g0209100 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113578460|dbj|BAF16823.1| Os05g0209100 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 645 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGGGGGSGP LPYSMRDVDG RGAYNNAKFR HRSRLKMASQ ALFTNSSKYQ CGKFTVGKFL  60
   61 SLLMVSGVIY LLVHKSSDGF VSGELHEKVG NTHTKKDFPK IRTFWRKPPR LPPRLPPNEI 120
  121 YRNNSLLLQS PQSEWTLRQK KVKEAFEHAW SGYRNYAMGY DELMPLTRRG IDGLGGLGAT 180
  181 VVDSLDTAII MGADDVVSEA SKWIEDNLMK KLSEKGQVNL FETTIRVLGG LLSAYHLSGG 240
  241 DKARGDSGIP MTSKRANPER LLEVSKDLAD RLLLAFTSSP TAIPLSDVVL RDRTAHAAPD 300
  301 GLSSTSEATT LQLEYSYLST ISGDPKYDLE AMKVLEHMRT LPTVEGLVPI YINPSSGQFS 360
  361 GENIRLGSRG DSYYEYLLKV WVQQERYRDT SLKYLFEMYT EAMKGVKHLL VRKTIPNGLV 420
  421 FVGELPYGRN SGFSPKMDHL VCFLPGTLAL GATKGITKKK ALENHLLTAE DIDNLQLAED 480
  481 LAKTCVEMYF VTSTGLAPEI AYFHIEGNSE GGPDGGNKSS QYVNDIIIKP LDRHNLLRPE 540
  541 TVESLFVLYR ITEDPKYREW GWQIFQAFEK YTRVDSGGYT SLDDVTSLPP PRRDKMETFF 600
  601 LGETLKYLYL LFGESNILPL DKYVFNTEAH PLPIIQSAQQ ISHSV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..645] PSI-BLAST 172.0 Crystal Structure Of Human Class I alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • mannosyl-oligosaccharide mannosidase activity
    		•  7.089685350864 bayes_pls_golite062009
  • mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
    		•  6.95179264736435 bayes_pls_golite062009
  • mannosidase activity
    		•  5.20286438265852 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  4.31319275372149 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  3.65589746311782 bayes_pls_golite062009
  • hydrolase activity
    		•  2.67964748309919 bayes_pls_golite062009
  • binding
    		•  1.49199031708525 bayes_pls_golite062009
  • catalytic activity
    		•  1.31873306707813 bayes_pls_golite062009
  • cation binding
    		•  0.362242764130218 bayes_pls_golite062009
  • metal ion binding
    		•  0.362242764130218 bayes_pls_golite062009
  • protein binding
    		•  0.36081692928767 bayes_pls_golite062009
  • ion binding
    		•  0.355220167272296 bayes_pls_golite062009
  • calcium ion binding
    		•  0.121126738064555 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.52

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle