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View Structure Prediction Details

Protein: gi|215697237, gi...
Organism: Oryza sativa Japonica Group
Length: 645 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215697237, gi....

Description E-value Query
Range
Subject
Range
gi|50933211, gi|... - gi|50933211|ref|XP_476133.1| putative alpha-mannosidase [Oryza sativa (japonica cultivar-group)], gi...
758.0 [0..30] [645..86]

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Predicted Domain #1
Region A:
Residues: [1-645]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGGGGGSGP LPYSMRDVDG RGAYNNAKFR HRSRLKMASQ ALFTNSSKYQ CGKFTVGKFL  60
   61 SLLMVSGVIY LLVHKSSDGF VSGELHEKVG NTHTKKDFPK IRTFWRKPPR LPPRLPPNEI 120
  121 YRNNSLLLQS PQSEWTLRQK KVKEAFEHAW SGYRNYAMGY DELMPLTRRG IDGLGGLGAT 180
  181 VVDSLDTAII MGADDVVSEA SKWIEDNLMK KLSEKGQVNL FETTIRVLGG LLSAYHLSGG 240
  241 DKARGDSGIP MTSKRANPER LLEVSKDLAD RLLLAFTSSP TAIPLSDVVL RDRTAHAAPD 300
  301 GLSSTSEATT LQLEYSYLST ISGDPKYDLE AMKVLEHMRT LPTVEGLVPI YINPSSGQFS 360
  361 GENIRLGSRG DSYYEYLLKV WVQQERYRDT SLKYLFEMYT EAMKGVKHLL VRKTIPNGLV 420
  421 FVGELPYGRN SGFSPKMDHL VCFLPGTLAL GATKGITKKK ALENHLLTAE DIDNLQLAED 480
  481 LAKTCVEMYF VTSTGLAPEI AYFHIEGNSE GGPDGGNKSS QYVNDIIIKP LDRHNLLRPE 540
  541 TVESLFVLYR ITEDPKYREW GWQIFQAFEK YTRVDSGGYT SLDDVTSLPP PRRDKMETFF 600
  601 LGETLKYLYL LFGESNILPL DKYVFNTEAH PLPIIQSAQQ ISHSV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 172.0
Match: 1x9dA
Description: Crystal Structure Of Human Class I alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
mannosyl-oligosaccharide mannosidase activity 7.089685350864 bayes_pls_golite062009
mannosyl-oligosaccharide 1,2-alpha-mannosidase activity 6.95179264736435 bayes_pls_golite062009
mannosidase activity 5.20286438265852 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 4.31319275372149 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 3.65589746311782 bayes_pls_golite062009
hydrolase activity 2.67964748309919 bayes_pls_golite062009
binding 1.49199031708525 bayes_pls_golite062009
catalytic activity 1.31873306707813 bayes_pls_golite062009
cation binding 0.362242764130218 bayes_pls_golite062009
metal ion binding 0.362242764130218 bayes_pls_golite062009
protein binding 0.36081692928767 bayes_pls_golite062009
ion binding 0.355220167272296 bayes_pls_golite062009
calcium ion binding 0.121126738064555 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle