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Protein Overview: ROC2_ORYSJ

General Information:
Name(s) found: ROC2_ORYSJ [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • Homeobox-leucine zipper protein ROC2 OS=Oryza sativa subsp. japonica GN=ROC2 PE=2 SV=1 [Swiss-Prot]
    • Organism: Oryza sativa Japonica Group
    Length: 784 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMIPARHMPS MIGRNGAAYG SSSALSLSQP NLLDNHQFQQ AFQHQQQQHH LLDQIPATTA  60
   61 ESGDNMIRSR ASDPLGGDEF ESKSGSENVD GVSVDDQDPN QRPRKKRYHR HTQHQIQEME 120
  121 AFFKECPHPD DKQRKELSRE LGLEPLQVKF WFQNKRTQMK NQHERHENSQ LRSDNEKLRA 180
  181 ENMRYKEALS SASCPNCGGP AALGEMSFDE HHLRIENARL REEIDRISAI AAKYVGKPMV 240
  241 PFPVLSNPMA AAASRAPLDL PVAPYGVPGD MFGGGGAGEL LRGVQSEVDK PMIVELAVAA 300
  301 MEELVRMAQL DEPLWSVAPP LDATAAAMET LSEEEYARMF PRGLGPKQYG LRSEASRDSA 360
  361 VVIMTHANLV EILMDANQYA AVFSNIVSRA ITLEVLSTGV AGNYNGALQV MSVEFQVPSP 420
  421 LVPTRESYFV RYCKQNADGT WAVVDVSLDS LRPSPVLKCR RRPSGCLIQE MPNGYSKVTW 480
  481 VEHVEVDDRS VHNIYKLLVN SGLAFGARRW VGTLDRQCER LASVMASNIP TSDIGVITSS 540
  541 EGRKSMLKLA ERMVVSFCGG VTASVAHQWT TLSGSGAEDV RVMTRKSVDD PGRPPGIVLN 600
  601 AATSFWLPVP PKRVFDFLRD ESSRSEWDIL SNGGIVQEMA HIANGRDQGN CVSLLRVNSS 660
  661 NSNQSNMLIL QESCTDASGS YVIYAPVDVV AMNVVLNGGD PDYVALLPSG FAILPDGPAH 720
  721 DGGDGDGGVG VGSGGSLLTV AFQILVDSVP TAKLSLGSVA TVNSLIACTV ERIKAAVSGE 780
  781 SNPQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..99] deduced N/A No confident structure predictions are available.
    2 View Details [100..165] PSI-BLAST 19.69897 Paired protein
    3 View Details [166..263] deduced N/A No confident structure predictions are available.
    4 View Details [264..531] FFAS03 2.51 No description for 2r55A was found.
    5 View Details [532..674] deduced N/A No confident structure predictions are available.
    6 View Details [675..784] MSA 3.065979 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.57

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle