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Protein Overview: AGO4B_ORYSJ

General Information:
Name(s) found: AGO4B_ORYSJ [Swiss-Prot]
Description(s) found:
Found 6 descriptions.
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  • Protein argonaute 4B OS=Oryza sativa subsp. japonica GN=AGO4B PE=2 SV=1 [Swiss-Prot]
    • Organism: Oryza sativa Japonica Group
    Length: 911 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAHDGEADE LPPPPPVPAN VVPIKADDVE SEVPANKPAK PKRFPMARPG LGRKGQPIQL  60
   61 LANHYKVSVK SSEEYFFHYN VILKYEDDRP VDGKGVGRKV IDKLQQTYRS ELSSKDFAYD 120
  121 GEKSLFTIGA LPQVTNEFTV VLEDVSTGKT AANGSPGGND SPGGSDRKRV RRPYQTKTFK 180
  181 VELCFAAKIP MNAIAQAIKG QESENSQEAL RVLDIILRQH SAKQGCLLVR QSFFHNNPNN 240
  241 FVDLGGGVMG CRGFHSSFRG TQSGLSLNID VSTTMIVKPG PVIDFLLANQ KVDHPDRIDW 300
  301 QKAKRALKNL RIRTTPVNSE FKIIGLSDRN CNEQMFSLRQ RNGNNGDVDE VEVTVYDYFV 360
  361 KNKGIELRYS GNLPCINVGK PKRPTYFPIE LCSLIPLQRY TKALSTLQRS SLVEKSRQKP 420
  421 QERMSVLNDA LRHSNYDSDP MLRASGISIA QNFTQVEGRV LQPPKLKAGN GEDIFPRNGR 480
  481 WNFNNKKLIQ TCSVDKWAVV NFSARCDVRN LIRDLIRNAS AKGIQMAEPF DVFEESPSLR 540
  541 RAPVSRRVDD MFEQIKSKLP GAPKFLLCLL PERKNCEVYG PWKRKCLAEF GIVTQCLAPQ 600
  601 RVNDQYLLNL LLKINAKLGG INSLLQIEAS PSIPLVSKTP TIILGMDVSH GQPGQSDRPS 660
  661 IAAVVSSRQW PLISKYRASV HTQSPKLEMM SSLFKPRGTE DDGLIRESLI DFYTSSGKRK 720
  721 PDHVIVFRDG VSESQFTQVI NIELDQIIEA CKFLDEKWSP KFTVIVAQKN HHTKFFQSGS 780
  781 PDNVPPGTVV DKQVCHPRNY DFYMCAHAGM IGTTRPTHYH VLHDEIGFSP DDLQELVHSL 840
  841 SYVYQRSTTA ISVVAPICYA HLAAAQVGTF LKFEDMSDAS SSQGGHTSVG SVPVPELPRL 900
  901 HEKVRSSMFF C

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..86] MSA 1.171992 View MSA. No confident structure predictions are available.
    2 View Details [87..911] PSI-BLAST 43.0 Crystal structure of full length Argonaute from Pyrococcus furiosus


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle