| Protein: | AGO4B_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 911 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGO4B_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
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924.0 | [0..1] | [911..1] |
|
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887.0 | [0..5] | [910..154] |
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878.0 | [0..3] | [910..162] |
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875.0 | [0..4] | [910..4] |
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874.0 | [0..4] | [910..33] |
|
|
874.0 | [0..25] | [911..22] |
|
|
873.0 | [0..32] | [911..43] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MDAHDGEADE LPPPPPVPAN VVPIKADDVE SEVPANKPAK PKRFPMARPG LGRKGQPIQL 60
61 LANHYKVSVK SSEEYFFHYN VILKYE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [87-911] |
1 11 21 31 41 51
| | | | | |
1 DDRPVDGKGV GRKVIDKLQQ TYRSELSSKD FAYDGEKSLF TIGALPQVTN EFTVVLEDVS 60
61 TGKTAANGSP GGNDSPGGSD RKRVRRPYQT KTFKVELCFA AKIPMNAIAQ AIKGQESENS 120
121 QEALRVLDII LRQHSAKQGC LLVRQSFFHN NPNNFVDLGG GVMGCRGFHS SFRGTQSGLS 180
181 LNIDVSTTMI VKPGPVIDFL LANQKVDHPD RIDWQKAKRA LKNLRIRTTP VNSEFKIIGL 240
241 SDRNCNEQMF SLRQRNGNNG DVDEVEVTVY DYFVKNKGIE LRYSGNLPCI NVGKPKRPTY 300
301 FPIELCSLIP LQRYTKALST LQRSSLVEKS RQKPQERMSV LNDALRHSNY DSDPMLRASG 360
361 ISIAQNFTQV EGRVLQPPKL KAGNGEDIFP RNGRWNFNNK KLIQTCSVDK WAVVNFSARC 420
421 DVRNLIRDLI RNASAKGIQM AEPFDVFEES PSLRRAPVSR RVDDMFEQIK SKLPGAPKFL 480
481 LCLLPERKNC EVYGPWKRKC LAEFGIVTQC LAPQRVNDQY LLNLLLKINA KLGGINSLLQ 540
541 IEASPSIPLV SKTPTIILGM DVSHGQPGQS DRPSIAAVVS SRQWPLISKY RASVHTQSPK 600
601 LEMMSSLFKP RGTEDDGLIR ESLIDFYTSS GKRKPDHVIV FRDGVSESQF TQVINIELDQ 660
661 IIEACKFLDE KWSPKFTVIV AQKNHHTKFF QSGSPDNVPP GTVVDKQVCH PRNYDFYMCA 720
721 HAGMIGTTRP THYHVLHDEI GFSPDDLQEL VHSLSYVYQR STTAISVVAP ICYAHLAAAQ 780
781 VGTFLKFEDM SDASSSQGGH TSVGSVPVPE LPRLHEKVRS SMFFC
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| Detection Method: | |
| Confidence: | 43.0 |
| Match: | 1u04A |
| Description: | Crystal structure of full length Argonaute from Pyrococcus furiosus |
Matching Structure (courtesy of the PDB): |
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