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Protein Overview: gi|115442219, gi...

General Information:
Name(s) found: gi|115442219 [NCBI NR]
gi|113534920 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|115442219|ref|NP_001045389.1| Os01g0947700 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113534920|dbj|BAF07303.1| Os01g0947700 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 632 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKATSTNNA FLSVFNLDME YVKIHIAKSR ITRVVQLGRW KRSRKHHIEL VGDNDLLKKV  60
   61 LACKNLRYLS LRGISLIESI PEAIGTLAEL LVLDLRACHN LEKLPGSIGS LLKLEYLDLS 120
  121 ECFLLEEMPK EIGELSKLQV LKGFLVGSSR KKSSPCRLAD LATKAQNLRK LNITTGRQSL 180
  181 VCDEDELCQL AKCQHLESLT ITWIGEASTE PYLPLPSSLT KLDLRRAPTA SLLNIIHPST 240
  241 SVSLKRLYIR GGKLRTLGQD GGWNVETLRA RCLNDLECEW SELHGLFREL RFVEMWRCAR 300
  301 LSFWPCDGRG VWDKGSPSLA RRSIGVCYGV KGNNLPPWHE VVQLYASNNI PAMRIFYPHH 360
  361 DVLEALRGTG IGISLDVEGQ FLPSFASEPS VAAAWVKTNV QAFYPAVSFK FITVGNQVAL 420
  421 REMRYILPAM QNIYAALSAV GLDHIKVSTS VRRDVLGLSY PPSAGAFSSA MEQYMAPIVQ 480
  481 FLAKIGAPLL ASVFPYFTYV HNQEGIDIDY ALFTSPGTVV QDGEHSYQNL FDAIVDALYS 540
  541 AMEKVGGSTV RIVVSDSGWP SAGAPAATKD NARAYVQNLI NHVSKGTPKR PVPIETYIFA 600
  601 MFNENEKTGD EIERNFGLFE PDKSPVYPIT FS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..558] PSI-BLAST 28.154902 The molecular structure of toll-like receptor 3 ligand binding domain
    2 View Details [559..632] PSI-BLAST 80.69897 Plant beta-glucanases


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle