| Protein: | gi|115442219, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 632 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115442219, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
321.0 | [0..345] | [632..51] |
|
Region A: Residues: [1-558] |
1 11 21 31 41 51
| | | | | |
1 MAKATSTNNA FLSVFNLDME YVKIHIAKSR ITRVVQLGRW KRSRKHHIEL VGDNDLLKKV 60
61 LACKNLRYLS LRGISLIESI PEAIGTLAEL LVLDLRACHN LEKLPGSIGS LLKLEYLDLS 120
121 ECFLLEEMPK EIGELSKLQV LKGFLVGSSR KKSSPCRLAD LATKAQNLRK LNITTGRQSL 180
181 VCDEDELCQL AKCQHLESLT ITWIGEASTE PYLPLPSSLT KLDLRRAPTA SLLNIIHPST 240
241 SVSLKRLYIR GGKLRTLGQD GGWNVETLRA RCLNDLECEW SELHGLFREL RFVEMWRCAR 300
301 LSFWPCDGRG VWDKGSPSLA RRSIGVCYGV KGNNLPPWHE VVQLYASNNI PAMRIFYPHH 360
361 DVLEALRGTG IGISLDVEGQ FLPSFASEPS VAAAWVKTNV QAFYPAVSFK FITVGNQVAL 420
421 REMRYILPAM QNIYAALSAV GLDHIKVSTS VRRDVLGLSY PPSAGAFSSA MEQYMAPIVQ 480
481 FLAKIGAPLL ASVFPYFTYV HNQEGIDIDY ALFTSPGTVV QDGEHSYQNL FDAIVDALYS 540
541 AMEKVGGSTV RIVVSDSG
|
| Detection Method: |  |
| Confidence: | 28.154902 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [559-632] |
1 11 21 31 41 51
| | | | | |
1 WPSAGAPAAT KDNARAYVQN LINHVSKGTP KRPVPIETYI FAMFNENEKT GDEIERNFGL 60
61 FEPDKSPVYP ITFS
|
| Detection Method: | |
| Confidence: | 80.69897 |
| Match: | 1ghsA |
| Description: | Plant beta-glucanases |
Matching Structure (courtesy of the PDB): |
|
