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Protein Overview: gi|215704672, gi...

General Information:
Name(s) found: gi|215704672 [NCBI NR]
gi|115441005 [NCBI NR]
gi|113534313 [NCBI NR]
Description(s) found:
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  • gi|215704672|dbj|BAG94300.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115441005|ref|NP_001044782.1| Os01g0844800 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113534313|dbj|BAF06696.1| Os01g0844800 [Oryza sativa Japonica Group] [NCBI NR]
  • Os01g0844800 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 1060 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISASAVAMR GEMGGGGGGG DEGELEDELD ALLGTGGAGA RRRGEDAGER ERELNMFRSG  60
   61 SAPPTIEGSL NAISGLLRGG GEAAVTVAAI PDAETLNGHG GLLSEDELRA DPAYLSYYYS 120
  121 HGNLNPRLPP PVLSKEDWRS TQRLKAGVVG GIGDGRKVSP EETGHEPTVG RPVFSQNVGF 180
  181 DQEEAARNDV GGAAEWVDGG GDGLIGLSLG RQRSFADILQ DNIGRRTPAS EHPSRAVSRN 240
  241 SFLDNQELLN SADSQYSMHN DILEAQRAVG NVQNVSGLPS INASASQTFA SVLGSSISRN 300
  301 ATPDSHYVPR VPSPGLPPVG VRINSNEKKL NCSSSFNTAS SKAVEPDDIL AAISNMNMSK 360
  361 DGTLGDSNSI SQSKFQSEIS DHQNISLDPK ALQVNKNQHS LMLEADTDYL GIPPISQPSN 420
  421 PSFSDINKNV SGLANIRNST NTRIDGHAEM QRSSTLSTRS YQKSPTSSNA SPGGSPAQHQ 480
  481 NIDNINSAFL NYGLGGYPLS PGLPSMMMNC MGSGNMPPLF ESAAAASAIA SFGADSRNLG 540
  541 NNILSSPTLS LSDVHNLGRT GNQTATGLLS PLSDPFYVQY LKATQYAAQG TANCSDPSLE 600
  601 RGFMGSQYGD LTAVQKAYIE ALLQQQKQYG MPLGKSTTSN HGYYGNLAFG MGMAYPGSPL 660
  661 GSPVASPSGP GSPLRLSERN MRFPSNLRNL GGWNSDPSGY MNDNFPSSLL DEFKSNKARS 720
  721 FELAEIASHV VEFSADQYGS RFIQQKLETA TVEEKDMVFK EIMPQALSLM TDVFGNYVVQ 780
  781 KFFEHGSAAQ RRELADQLFG HVLALSLQMY GCRVIQKAIE VVDLDQKTKM VTELDGHIMR 840
  841 CVRDQNGNHV IQKCIECVPE DSIQFIISTF YGQVVPLSTH PYGCRVIQRV LEHCTDPKTQ 900
  901 EIVMDEILQS VCMLAQDQYG NYVVQHVLEH GKPHERSVII EKLAGQIIQM SQQKFASNVV 960
  961 EKCLTFGGPA EREVLINEML GTTDENEPLQ AMMKDQFGNY VVQKVLETCD DQQRELILSR1020
 1021 VKVHLSALKK YTYGKHIVAR VEKLVAAGER RIGLQAQYPS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..681] PSI-BLAST 9.69897 No description for 1y0fA was found.
    2 View Details [682..1060] PSI-BLAST 151.0 Pumilio 1


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle