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Protein Overview: gi|113532213, gi...

General Information:
Name(s) found: gi|215694337 [NCBI NR]
gi|115435848 [NCBI NR]
gi|113532213 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|215694337|dbj|BAG89330.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115435848|ref|NP_001042682.1| Os01g0267100 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113532213|dbj|BAF04596.1| Os01g0267100 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 764 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLQLADYHL RMDSRSPKIP RRSPDSKDKD SDRNKERDAK NDWDSSRAYG SETDCKEEMC  60
   61 DSNKRKGLTM GEIVVDNSRS VDSCHETELH VLRDDRQDKS VEIKDILHDG VAKSDYAQRQ 120
  121 IDLDSERRNG TGDNSRVDVL RDDKLDSGRD RNWSDRTREP EGSKDYVRNR QWQDSKEAND 180
  181 SEWKNAHERL DGGSFHGRAG YRRDSRGRSE SIRGSSTYGG RYDSSDSIEI RPNNNLDFGR 240
  241 EGSVSGRRYD VGAHRDATPG TNGDKSANPE ADQSGSTSTI SQFPQHGPKG DRSSRGRGRP 300
  301 NSRDSQRVGG TLPIMPPPFG PLGLPPGPMQ HIGPNIPHSP GPLLPGVFVP PFPGPLVWPG 360
  361 ARGVDVNMLS VPPNLPIPPV AAEHRFAPSM GAGPGHNIHL NQIGSGIGAP TNVSGLSFHQ 420
  421 LGTQSREMAH DKPPAGGGWT PHRNSGPTRK APSRGEQNDY SQNFVDTGMR PQNFIRELDL 480
  481 TSVAEDYPKL RELIQRKDEI VANSASPPMY YKCDLRQHVL SPEFFGTKFD VILVDPPWEE 540
  541 YVHRAPGITD HIEYWNAEEI MNLKIEAIAD TPSFVFLWVG DGVGLEQGRQ CLKKWGFRRC 600
  601 EDVCWVKTNK KNATPSLRHD SHTILQHSKE HCLMGIKGTV RRSTDGHVIH ANIDTDIIIA 660
  661 EEPTDGSTKK PEDMYRIIEH FALGKRRLEL FGEDHNIRPG WLTLGKGLSY SNFNKEAYIK 720
  721 NFADKDGKVW QGGGGRNPPP EAPHLVVTTP EIEGLRPKSP PQKN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..513] PSI-BLAST 47.69897 No description for 1y0fB was found.
    2 View Details [514..764] FFAS03 2.32 m.RsrI N6 adenosine-specific DNA methyltransferase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • transcription regulator activity
    		•  2.0575172077414 bayes_pls_golite062009
  • DNA binding
    		•  1.88381059204371 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.77056456783692 bayes_pls_golite062009
  • transcription activator activity
    		•  1.20293696636521 bayes_pls_golite062009
  • catalytic activity
    		•  1.16970557486814 bayes_pls_golite062009
  • binding
    		•  1.07920137096551 bayes_pls_golite062009
  • protein binding
    		•  0.93740975926081 bayes_pls_golite062009
  • transferase activity
    		•  0.822796502536128 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  0.595744926345621 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.594542456257254 bayes_pls_golite062009
  • N-methyltransferase activity
    		•  0.592844911123979 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.585815822953454 bayes_pls_golite062009
  • hydrolase activity
    		•  0.341265067793022 bayes_pls_golite062009
  • RNA methyltransferase activity
    		•  0.0387983354338144 bayes_pls_golite062009
  • histone methyltransferase activity
    		•  0.0204031715098651 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle