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Protein Overview: CE40070

General Information:
Name(s) found: CE40070 [WormBase]
Description(s) found:
Found 10 descriptions.
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  • WBGene00018856 status:Confirmed UniProt:Q94238 protein_id:AAB07562.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 284 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: double-stranded RNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPNFPTLP INPARSQGPK CKGEQKAAVD PLTVLSPLLN EKSVISIIHE KAQQLKLKIN  60
   61 FEVLEEGGDQ HNRQYAVRYT LVADDNVVKA KAMGKGKNKK SAQQEACTQL LATVEHLTLA 120
  121 ANVRKTEKNQ ATMKKDEEID VLNPVAQLNE YAQKFYKKYP TFEFVKEQAV GKHREFVIQA 180
  181 TFENKTLEGR GPSKIISKRA AAEAILESIG FIKPSLSKPD TSEAAHLSPE QTDTNEKRTL 240
  241 SPDTKELTVT FNSTELTDIN EKQKVQMEKV HACLSEFEII DTLN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..284] PSI-BLAST 28.0 Crystal structure of RNase III from Aquifex Aeolicus complexed with double-stranded RNA at 2.5-angstrom resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.602312874472495 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.00837845982391983 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle