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Protein Overview: RP6L1_ARATH

General Information:
Name(s) found: RP6L1_ARATH [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
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  • Protein RRP6-like 1 OS=Arabidopsis thaliana GN=RRP6L1 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 637 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA][ISS]
    Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process [IEA]
    Molecular Function: nucleic acid binding [IEA][ISS]
    3'-5' exonuclease activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFDDPMDEF KRNRKMEEDS KKVIDVKVAE SDKGFAKFGK AEVPFHIPTL TKPQEEYKIL  60
   61 VDNANNPFEH VLLEKSEDGL RFIHPLEELS VMDFVDRNLS EMRPVKPLPL EETPFKLVEE 120
  121 VKDLEDLAAA LQSVEEFAVD LEHNQYRTFQ GLTCLMQIST RTEDYIVDIF KLWDHIGPYL 180
  181 RELFKDPKKK KVIHGADRDI IWLQRDFGIY VCNLFDTGQA SRVLKLERNS LEFLLKHYCG 240
  241 VAANKEYQKA DWRIRPLPDV MKRYAREDTH YLLYIYDVMR MELHTMAKED EQSDSPLVEV 300
  301 YKRSYDVCMQ LYEKELWTRD SYLHVYGVQT GNLNAVQLSI VAGLCEWRDR IARADDESTG 360
  361 YVLPNKTLFD IAKEMPIVVA QLRRLLKSKL PYLERNFDAV ISVIRRSMQN AAAFEPVVQS 420
  421 LKDRRPETVV EMNIEPKIEK TDTGASASSL SLEKVCVDDS KKQSSGFGVL PLKRKLESDK 480
  481 TVVEKNIEPK IEKTGTEASA SSLSSKKVCV DDSKKQSSGF GVLLSKRKFE SDNKVKEEVK 540
  541 VSKSKPDKVI IVVDDDDDDD DDESYEQSTK AADALDRVSE TPSKGSPSLT QKPKTCNTEV 600
  601 IVLDDDDDSE SREDEDMRRR SEKHRRFMNM KRGFLNI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..113] PSI-BLAST 46.39794 No description for 2hbjA was found.
    2 View Details [114..637] PSI-BLAST 109.0 STRUCTURE OF LARGE FRAGMENT OF ESCHERICHIA COLI DNA POLYMERASE I COMPLEXED WITH D/TMP


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle