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Protein Overview: gi|110741670, gi...

General Information:
Name(s) found: gi|186522847 [NCBI NR]
gi|110741670 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|186522847|ref|NP_196950.2| pseudouridine synthase/ transporter [Arabidopsis thaliana] [NCBI NR]
  • gi|110741670|dbj|BAE98781.1| tRNA synthase - like protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 540 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: pseudouridine synthesis [IEA]
    tRNA pseudouridine synthesis [IEA]
    tRNA processing [IEA]
    RNA modification [ISS]
    Molecular Function: pseudouridine synthase activity [TAS]
    transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKSLHFTRL MSSSARMSMT SPLFFSSVKP WRNIHKPYLA SLFLSTTSTR YPLQYDMIIN  60
   61 RPTQSSLSQN RRRPPKAIES GAPDSAEPEF DSWVDNKLAM EREQGRPGSG DPEMDKAKRK 120
  121 YYSKRRKRLY GSDSEDENSS RKSDEGFVEL KPEVVEFDRL HQREEELYFY DTFAYPWEKD 180
  181 KHYKMVYQLE KKYYPDQCLD KAFLQPGEVL KKSDDSGKVR GKKKVVAALG GKRSEVKRIG 240
  241 MENCDEDDDK LVFFDEVKEK EEKKKSEDDV VVVTEKKVEQ FFKGLTKSPN EKGMASGGGD 300
  301 GEPFLVTRNG ELPPRWDGPN GTVLLVNKPK GWTSFTVCGK LRRLVKVKKV GHAGTLDPMA 360
  361 TGLLIVCVGK ATKVVDRYQG MIKGYSGVFR LGEATSTLDA DSPVIQRESW EHIKDDDIKK 420
  421 ALTSFLGEIW QVPPMFSAIK VGGEKMYEKA RRGETVELSP RRISIFQFDI ERSLDDRQNL 480
  481 IFRVICSKGT YIRSLCADLA KALGSCAHLT ALRRDSIGEY SANDAWEFNE LEAAITKNYF 540
  541

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..145] deduced N/A No confident structure predictions are available.
    2 View Details [146..320] deduced N/A No confident structure predictions are available.
    3 View Details [321..540] PSI-BLAST 79.69897 Crystal Structure of tRNA Pseudouridine Synthase TruB and Its RNA Complex: RNA-protein Recognition Through a Combination of Rigid Docking and Induced Fit


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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