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Protein Overview: gi|110738909, gi...

General Information:
Name(s) found: gi|145332787 [NCBI NR]
gi|110738909 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|145332787|ref|NP_001078259.1| RNA binding [Arabidopsis thaliana] [NCBI NR]
  • gi|110738909|dbj|BAF01376.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 697 amino acids

    Gene Ontology:
    Cellular Component: plastid chromosome [IDA]
    Biological Process: NONE FOUND
    Molecular Function: RNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQICQTKLNF TFPNPTNPNF CKPKALQWSP PRRISLLPCR GFSSDEFPVD ETFLEKFGPK  60
   61 DKDTEDEARR RNWIERGWAP WEEILTPEAD FARKSLNEGE EVPLQSPEAI EAFKMLRPSY 120
  121 RKKKIKEMGI TEDEWYAKQF EIRGDKPPPL ETSWAGPMVL RQIPPRDWPP RGWEVDRKEL 180
  181 EFIREAHKLM AERVWLEDLD KDLRVGEDAT VDKMCLERFK VFLKQYKEWV EDNKDRLEEE 240
  241 SYKLDQDFYP GRRKRGKDYE DGMYELPFYY PGMVCEGTVT TLHLYQGAFV DIGGVHEGWV 300
  301 PIKGNDWFWI RHFIKVGMHV IVEITVILRH IFFFRIYKNL NGNCFILLFL LFFQAKRDPY 360
  361 RFRFPLELRF VHPNIDHMIF NKFDFPPIFH RDGDTNPDEI RRDCGRPPEP RKDPGSKPEE 420
  421 EGLLSDHPYV DKLWQIHVAE QMILGDYEAN PAKYEGKKLS ELSDDEDFDE QKDIEYGEAY 480
  481 YKKTKLPKVI LKTSVKELDL EAALTERQHH NKLMMEAKAR GEGYKIDKLR RNIEMDEYDF 540
  541 LHWRRSLEER EALLRDISSR QALGLPLEEP GRYKPGSFFG KDQYDPTSAL YQYDYWGEPK 600
  601 NSEISKQERM KDAHNKSIVG KGNVWYDMSY DDAIKQTIEK RKEGSTLASQ EEETESEEEE 660
  661 EDDDDFDDFD YSILSDESSI GYSEQQPLVN GTQVLTD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..257] deduced N/A No confident structure predictions are available.
    2 View Details [258..382] MSA 1.007973 View MSA. No confident structure predictions are available.
    3 View Details [383..498] deduced N/A No confident structure predictions are available.
    4 View Details [499..584] deduced N/A No confident structure predictions are available.
    5 View Details [585..697] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.65

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle