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Protein Overview: gi|110737476, gi...

General Information:
Name(s) found: gi|145358707 [NCBI NR]
gi|110737476 [NCBI NR]
Description(s) found:
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  • gi|145358707|ref|NP_198929.2| acyltransferase/ catalytic [Arabidopsis thaliana] [NCBI NR]
  • gi|110737476|dbj|BAF00681.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • | Symbols: | catalytic | chr5:16476942-16480469 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Esterase/lipase/thioesterase family protein | chr5:16459714-16463241 REVERSE LENGTH=688 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Esterase/lipase/thioesterase-containing protein OS=Arabidopsis thaliana GN=At5g41130 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of F4JWY1, Esterase/lipase/thioesterase family protein OS=Arabidopsis thaliana GN=At5g41130 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 688 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: metabolic process [IEA]
    Molecular Function: catalytic activity [ISS]
    acyltransferase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVPTLCIAD GIYPTAFFYR NSVRRLTSVA HDRFTNPKFG IDGRLRNGPK VTATVNPYTY  60
   61 TEAAQPEERK SLTDFLVEAR DFVRSDGGDG GPPRWFSPLE CGARAPESPL LLYLPGIDGT 120
  121 GLGLIRQHKR LGEIFDIWCL HFPVTDRTPA RDLVKLIERT VRSEYFRLPK RPIYIVGESI 180
  181 GACLALDVAA SNPDIDLVLI LANPVTRVNN FMLQPLSSLL EILPDGVPSF LEENFRFEQG 240
  241 YPFAAMFETM LNETDAAQIG GGLLGDLFAT SVNLPTLARI FPKDTLLWKL QLLKSASASA 300
  301 KSHMYTVKAQ TLILLSGRDQ WLLNKEDIEK LHCTLPNCEV RKFENYGQLL FLEDGVDLVT 360
  361 IIKCTYYYRR GKLLDYVSDF ILPTPFELKE YEESQRLLTA ITSPVFLSTL DNGTVVRSLA 420
  421 GIPSEGPVLY VGNHMLLGTE LRPAAIHFLK EKNILLRGLA HPVMFAKKYG SKLPDMHMFD 480
  481 SVRMIGAVPV SNINFYKLLR SKAHVVLYPG GVREALHRKG EVYKLFWPEH SEFVRTASKF 540
  541 GTKIIPFGVV GEDDLCEVVF DYNDQMKIPF LKNLIKELSQ DSTYLRNGEE GEVGNQDLHM 600
  601 PGIVPKMPGR FYVYFGKPIY TEGREDELND KEKAHEVYLQ VKSEVERCMT YLKIKREGDP 660
  661 YRNILARSLY HFSHGFSSQV PTFDLRNQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..367] PSI-BLAST 43.30103 Human soluble Epoxide Hydrolase
    2 View Details [368..459] PSI-BLAST 29.221849 No description for 2zjfA was found.
    3 View Details [460..688] MSA 8.332984 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle