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View Structure Prediction Details

Protein: gi|110737476, gi...
Organism: Arabidopsis thaliana
Length: 688 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|110737476, gi....

Predicted Domain #1
Region A:
Residues: [1-367]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVPTLCIAD GIYPTAFFYR NSVRRLTSVA HDRFTNPKFG IDGRLRNGPK VTATVNPYTY  60
   61 TEAAQPEERK SLTDFLVEAR DFVRSDGGDG GPPRWFSPLE CGARAPESPL LLYLPGIDGT 120
  121 GLGLIRQHKR LGEIFDIWCL HFPVTDRTPA RDLVKLIERT VRSEYFRLPK RPIYIVGESI 180
  181 GACLALDVAA SNPDIDLVLI LANPVTRVNN FMLQPLSSLL EILPDGVPSF LEENFRFEQG 240
  241 YPFAAMFETM LNETDAAQIG GGLLGDLFAT SVNLPTLARI FPKDTLLWKL QLLKSASASA 300
  301 KSHMYTVKAQ TLILLSGRDQ WLLNKEDIEK LHCTLPNCEV RKFENYGQLL FLEDGVDLVT 360
  361 IIKCTYY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.30103
Match: 1s8oA
Description: Human soluble Epoxide Hydrolase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [368-459]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YRRGKLLDYV SDFILPTPFE LKEYEESQRL LTAITSPVFL STLDNGTVVR SLAGIPSEGP  60
   61 VLYVGNHMLL GTELRPAAIH FLKEKNILLR GL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.221849
Match: 2zjfA
Description: No description for 2zjfA was found.

Predicted Domain #3
Region A:
Residues: [460-688]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AHPVMFAKKY GSKLPDMHMF DSVRMIGAVP VSNINFYKLL RSKAHVVLYP GGVREALHRK  60
   61 GEVYKLFWPE HSEFVRTASK FGTKIIPFGV VGEDDLCEVV FDYNDQMKIP FLKNLIKELS 120
  121 QDSTYLRNGE EGEVGNQDLH MPGIVPKMPG RFYVYFGKPI YTEGREDELN DKEKAHEVYL 180
  181 QVKSEVERCM TYLKIKREGD PYRNILARSL YHFSHGFSSQ VPTFDLRNQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle