Protein Overview: vps-39

General Information:
Name(s) found:	vps-39 / CE40122 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00011625 locus:vps-39 status:Confirmed UniProt:Q1ZXS5 protein_id:CAJ85769.1 [WormBase] gi\|90185939\|emb\|CAJ85769.1\| C. elegans protein T08G5.5b, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR] gi\|115533284\|ref\|NP_001041164.1\| related to yeast Vacuolar Protein Sorting factor family member (vps-39) [Caenorhabditis elegans] [NCBI NR] CE40122 WBGene00011625 locus:vps-39 status:Confirmed UniProt:Q1ZXS5_CAEEL protein_id:CAJ85769.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE40122 WBGene00011625 status:Confirmed UniProt:Q1ZXS5_CAEEL protein_id:CAJ85769.1\| [wormORF-contam.fasta] CE40122 WBGene00011625 status:Confirmed TR:Q1ZXS5 protein_id:CAJ85769.1 [wormpep160-contam.fasta] Hypothetical protein T08G5.5b [Caenorhabditis elegans] [nr-271106-contam.fasta] T08G5.5b [Caenorhabditis elegans] [nr-271106-contam.fasta] CE40122 WBGene00011625 locus:vps-39 status:Confirmed UniProt:Q1ZXS5 protein_id:CAJ85769.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] Related to yeast Vacuolar Protein Sorting factor OS=Caenorhabditis elegans GN=vps-39 PE=1 SV=1 [CAEEL.fasta.20160308]
Organism:	Caenorhabditis elegans
Length:	926 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	cell death [IMP] morphogenesis of an epithelium [IMP] embryonic development ending in birth or egg hatching [IMP]
Molecular Function:	small GTPase regulator activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYDAYTPCEV ALRLPVEVTC LAFQESNQTL LAGGRAGHLY AYTISANRRG FELTNICKSF  60
   61 HKKAVMELKV CQREDLLLCV SDGQLMAHKL SDPEYKVETL IHKVKPVQTF ARFSPKTSGD 120
  121 LYVIVSSRKK LYLFKWGEKD GHKEFIEVAL DYNPVFLDTP TSIRCVGEMV FFSVRNEYFS 180
  181 MTMQKDKTTT SPSEGSTPEG WNGFVTRLLN FNCQPGIVPM IDRRRVAFVR NEIVVTTDIW 240
  241 GQRPANVLSD EYKFSEVPMQ IVYDSPYLVG MLSKGRVEVR SIFDGQLVQT MSLPKAMTLC 300
  301 SGARGQVFVA ALSDIWILDT SQNLRKNVSH LIQERHFELA IQLAENSNLF AEEQKLEIKK 360
  361 KAALNLFNQK KFDESFALFG EIKTDISEVL SIIRMFPELL PDGFQSMTGV VSDMPANDRM 420
  421 RALLALGSYL SEIRTEHAKH IELYNRLYSS GAAKKTDEDE KAKLLLTLRV VDTTLLKCYI 480
  481 KTKPMLVDSL IRLQSNACTF EDAKKILESE GRLRSLFILY ETRKKHEMAL DLFIDQSSRP 540
  541 DADPFFDDAI QQIVEYLQSL GNSNLPLILK YAKWVLAKNL EAGVQIFTSD ETEMARNLNR 600
  601 KAVVEFLKSE CPDALIPYLE HVIFKWEEPS SYFHETLLEF YVARVNTLFK DYVHAFPDAF 660
  661 SDENITRAGD EDGELGLYRK RLLKFLEVSH SYSPQTVLLQ LAPHAFYEER ALILGRLKQH 720
  721 EQALAIYVNT LKNVPAAEEY CRLYYNAHDE TNSQVYLMLF RTLVHPNQQQ LHSIPYHADS 780
  781 TPFGSYRDDV SEASTLVNST SSYQPDVNTA IKILAKHADK IDTVGALNML PATTPLRVVF 840
  841 SAINAVIQTT GRQASTRKME KSVSQCAMSK KLERKNKAQS TKIIVNFSSE CVVCEKKIAV 900
  901 SAFVRYPDGR LAHLYCHNDS QGGNRN

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.98

Protein Overview: vps-39

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: