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Protein Overview: gi|38201680, gi|...

General Information:
Name(s) found: gi|56204504 [NCBI NR]
gi|38201680 [NCBI NR]
gi|21706947 [NCBI NR]
gi|119595932 [NCBI NR]
Description(s) found:
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  • gi|56204504|emb|CAI21522.1| SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae) [Homo sapiens] [NCBI NR]
  • gi|38201680|ref|NP_937998.1| meiotic recombination protein SPO11 isoform b [Homo sapiens] [NCBI NR]
  • gi|21706947|gb|AAH33591.1| SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae) [Homo sapiens] [NCBI NR]
  • gi|119595932|gb|EAW75526.1| SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae), isoform CRA_a [Homo sapiens] [NCBI NR]
  • Similar to SPO11 meiotic protein covalently bound to DSB-like [hmr_yeast5_DM3-1_pombe.fasta]
  • meiotic recombination protein SPO11 isoform b [HMR_022704.fasta]
  • meiotic recombination protein SPO11 isoform b; SPO11, meiotic protein covalently bound to DSB (S. cerevisiae)-like [071204_hmrz_cont.fasta]
  • meiotic recombination protein SPO11 isoform b [Homo sapiens]gi|21706947|gb|AAH33591.1| Meiotic recombination protein SPO11, isoform b [Homo sapiens] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=9606 Splice Isoform 2 of Meiotic recombination protein SPO11 [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta]
  • meiotic recombination protein SPO11 isoform b [Homo sapiens] [NCBI-RefSeq_Human_na_12_06_2006_con_reversed.fasta]
  • Tax_Id=9606 Meiotic recombination protein SPO11, isoform b [EBI-IPI_human_3.04_03-07-2005_reverse.fasta]
  • meiotic recombination protein SPO11 isoform b; SPO11, meiotic protein covalently bound to DSB (S. cerevisiae)-like [Homo sapiens] [HumanGallus06162005.fasta]
  • SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae) [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae), isoform CRA_a [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Tax_Id=9606 Isoform 2 of Meiotic recombination protein SPO11 [EBI-IPI_human_3.23_11-02-2006_con_reversed.fasta]
  • Tax_Id=9606 MEIOTIC RECOMBINATION PROTEIN SPO11, ISOFORM B [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=SPO11 Isoform 2 of Meiotic recombination protein SPO11 [human-ipi-250309-contam.fasta]
  • SPO11 [Homo sapiens] [nr-271106-contam.fasta]
  • IPI:IPI00181896.1|SWISS-PROT:Q9Y5K1-2|ENSEMBL:ENSP00000316034|REFSEQ:NP_937998|VEGA:OTTHUMP00000031361 Tax_Id=9606 Gene_Symbol=SPO11 Isoform 2 of Meiotic recombination protein SPO11 [ipi.HUMAN.fasta.20090807]
  • [human_BMb_040710_contam.fasta]
  • Isoform 2 of Meiotic recombination protein SPO11 OS=Homo sapiens GN=SPO11 [011711_HMR.fasta]
  • GeneSymbol=SPO11 Synonyms=CT35|MGC39953 meiotic recombination protein SPO11 isoform b [Homo sapiens] [NCBI-RefSeq_Human_Seno_07-12-2011_reversed.fasta]
  • Isoform 2 of Meiotic recombination protein SPO11 GN=SPO11 [Doctor+uniprot-HUMAN-120911.fasta]
  • Isoform of Q9Y5K1, Isoform 2 of Meiotic recombination protein SPO11 OS=Homo sapiens GN=SPO11 [2016-04-human-contam-aPKC-His-Par6.fasta]
    • Organism: Homo sapiens
    Length: 358 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFAPMGPEA SFFDVLDRHR ESLLAALRRG GREPPTGGSR LASRFEDSVG LQMVSHCTTR  60
   61 KIKSDSPKSA QKFSLILKIL SMIYKLVQSN TYATKRDIYY TDSQLFGNQT VVDNIINDIS 120
  121 CMLKVSRRSL HILSTSKGLI AGNLRYIEED GTKVNCTCGA TAVAVPSNIQ GIRNLVTDAK 180
  181 FVLIVEKDAT FQRLLDDNFC NKLSPCIMIT GKGVPDLNTR LLVKKLWDTF HVPVFTLVDA 240
  241 DPHGIEIMCI YKYGSMSMSF EAHHLTVPAI RWLGLLPSDL KRLNVPKDSL IPLTKRDQMK 300
  301 LDSILRRPYV TCQPFWRKEM EIMADSKMKA EIQALTFLSS DYLSRVYLPN KLKFGGWI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..358] PSI-BLAST 89.69897 DNA topoisomerase IV, alpha subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.517579458725582 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle