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Protein Overview: TSC1

General Information:
Name(s) found: TSC1 [HGNC (HUGO)]
Description(s) found:
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  • gi|9297077|sp|Q92574.2|TSC1_HUMAN RecName: Full=Hamartin; AltName: Full=Tuberous sclerosis 1 protein [NCBI NR]
  • pir||T03814 tumor suppressor protein hamartin - human [NCBI NR]
  • gi|55665151|emb|CAH72112.1| tuberous sclerosis 1 [Homo sapiens] [NCBI NR]
  • gi|4507693|ref|NP_000359.1| tuberous sclerosis 1 protein isoform 1 [Homo sapiens] [NCBI NR]
  • gi|2331281|gb|AAC51674.1| hamartin [Homo sapiens] [NCBI NR]
  • gi|119608427|gb|EAW88021.1| tuberous sclerosis 1 [Homo sapiens] [NCBI NR]
  • tuberous sclerosis 1 [HGNC (HUGO)]
  • Hamartin OS=Homo sapiens GN=TSC1 PE=1 SV=2 [Swiss-Prot]
  • Hamartin [hmr_yeast5_DM3-1_pombe.fasta]
  • tuberous sclerosis 1; hamartin; TSC1 gene (hamartin); tuberous sclerosis 1 (hamartin) [HMR_022704.fasta]
  • tuberous sclerosis 1; TSC1 gene (hamartin); tuberous sclerosis 1 (hamartin) [071204_hmrz_cont.fasta]
  • tuberous sclerosis 1 [Homo sapiens]gi|55665151|emb|CAH72112.1| tuberous sclerosis 1 [Homo sapiens]gi|9297077|sp|Q92574|TSC1_HUMAN Hamartin (Tuberous sclerosis 1 protein)gi|7513407|pir||T03814 tumor suppressor protein hamartin - humangi|2331281|gb|AAC5 [nrdb_11152004_Chlamydomonas]
  • Hamartin (Tuberous sclerosis 1 protein) [Yateslab_human_na_07-28-2006_reversed.fasta]
  • Tax_Id=9606 Hamartin [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta]
  • (NM_000368) TSC1 gene (hamartin); hamartin; tuberous sclerosis 1 [Homo sapiens] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • tuberous sclerosis 1 protein isoform 1 [Homo sapiens] [NCBI-RefSeq_Human_na_12_06_2006_con_reversed.fasta]
  • tuberous sclerosis 1; TSC1 gene (hamartin); tuberous sclerosis 1 (hamartin) [Homo sapiens] [HumanGallus06162005.fasta]
  • tuberous sclerosis 1; hamartin; TSC1 gene (hamartin); tuberous sclerosis 1 (hamartin) [Homo sapiens] [human-NCBI-042104-rand.fasta]
  • tuberous sclerosis 1 [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • hamartin [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Tax_Id=9606 HAMARTIN [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=TSC1 Hamartin [human-ipi-250309-contam.fasta]
  • IPI:IPI00022043.1|SWISS-PROT:Q92574|ENSEMBL:ENSP00000298552;ENSP00000394524|REFSEQ:NP_000359|H-INV:HIT000062252|VEGA:OTTHUMP00000022439 Tax_Id=9606 Gene_Symbol=TSC1 Hamartin [ipi.HUMAN.fasta.20090807]
  • [human_BMb_040710_contam.fasta]
  • Tax_Id=9606 Gene_Symbol=TSC1 Hamartin ENSG00000165699 IPI00022043 IPI00384490 IPI00745368 [drosphohumanreversed.fasta]
  • Q92574;Q5VVN5; RecName: Full=Hamartin; AltName: Full=Tuberous sclerosis 1 protein; [UniProt_Human_2010_06_06-01-2010_reversed.fasta]
  • Hamartin OS=Homo sapiens GN=TSC1 [011711_HMR.fasta]
  • GeneSymbol=TSC1 Synonyms=KIAA0243|LAM|MGC86987|TSC hamartin isoform 1 [Homo sapiens] [NCBI-RefSeq_Human_Seno_07-12-2011_reversed.fasta]
  • Hamartin GN=TSC1 [Doctor+uniprot-HUMAN-120911.fasta]
  • Tuberous sclerosis 1 isoform A (Fragment) OS=Homo sapiens GN=TSC1 PE=2 SV=1 [uniprot-human-031015-contam.fasta]
    • Organism: Homo sapiens
    Length: 1164 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQQANVGEL LAMLDSPMLG VRDDVTAVFK ENLNSDRGPM LVNTLVDYYL ETSSQPALHI  60
   61 LTTLQEPHDK HLLDRINEYV GKAATRLSIL SLLGHVIRLQ PSWKHKLSQA PLLPSLLKCL 120
  121 KMDTDVVVLT TGVLVLITML PMIPQSGKQH LLDFFDIFGR LSSWCLKKPG HVAEVYLVHL 180
  181 HASVYALFHR LYGMYPCNFV SFLRSHYSMK ENLETFEEVV KPMMEHVRIH PELVTGSKDH 240
  241 ELDPRRWKRL ETHDVVIECA KISLDPTEAS YEDGYSVSHQ ISARFPHRSA DVTTSPYADT 300
  301 QNSYGCATST PYSTSRLMLL NMPGQLPQTL SSPSTRLITE PPQATLWSPS MVCGMTTPPT 360
  361 SPGNVPPDLS HPYSKVFGTT AGGKGTPLGT PATSPPPAPL CHSDDYVHIS LPQATVTPPR 420
  421 KEERMDSARP CLHRQHHLLN DRGSEEPPGS KGSVTLSDLP GFLGDLASEE DSIEKDKEEA 480
  481 AISRELSEIT TAEAEPVVPR GGFDSPFYRD SLPGSQRKTH SAASSSQGAS VNPEPLHSSL 540
  541 DKLGPDTPKQ AFTPIDLPCG SADESPAGDR ECQTSLETSI FTPSPCKIPP PTRVGFGSGQ 600
  601 PPPYDHLFEV ALPKTAHHFV IRKTEELLKK AKGNTEEDGV PSTSPMEVLD RLIQQGADAH 660
  661 SKELNKLPLP SKSVDWTHFG GSPPSDEIRT LRDQLLLLHN QLLYERFKRQ QHALRNRRLL 720
  721 RKVIKAAALE EHNAAMKDQL KLQEKDIQMW KVSLQKEQAR YNQLQEQRDT MVTKLHSQIR 780
  781 QLQHDREEFY NQSQELQTKL EDCRNMIAEL RIELKKANNK VCHTELLLSQ VSQKLSNSES 840
  841 VQQQMEFLNR QLLVLGEVNE LYLEQLQNKH SDTTKEVEMM KAAYRKELEK NRSHVLQQTQ 900
  901 RLDTSQKRIL ELESHLAKKD HLLLEQKKYL EDVKLQARGQ LQAAESRYEA QKRITQVFEL 960
  961 EILDLYGRLE KDGLLKKLEE EKAEAAEAAE ERLDCCNDGC SDSMVGHNEE ASGHNGETKT1020
 1021 PRPSSARGSS GSRGGGGSSS SSSELSTPEK PPHQRAGPFS SRWETTMGEA SASIPTTVGS1080
 1081 LPSSKSFLGM KARELFRNKS ESQCDEDGMT SSLSESLKTE LGKDLGVEAK IPLNLDGPHP1140
 1141 SPPTPDSVGQ LHIMDYNETH HEHS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run gi|14317902, gi|... No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..194] MSA 1.011947 View MSA. No confident structure predictions are available.
    2 View Details [195..305] deduced N/A No confident structure predictions are available.
    3 View Details [306..396] PSI-BLAST 6.522879 Tropomyosin
    4 View Details [397..738] PSI-BLAST 24.0 Heavy meromyosin subfragment
    5 View Details [739..907] PSI-BLAST 4.69897 No description for 2i1jA was found.
    6 View Details [908..1049] FFAS03 1.33 Crystal structure of human GGA1 GAT domain complexed with the GAT-binding domain of Rabaptin5
    7 View Details [1050..1164] MSA 2.579996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.50

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle