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Protein Overview: TSFM

General Information:
Name(s) found: TSFM [HGNC (HUGO)]
Description(s) found:
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  • gi|4416086|gb|AAD20224.1| elongation factor Ts [Homo sapiens] [NCBI NR]
  • gi|171846268|ref|NP_005717.3| Ts translation elongation factor, mitochondrial precursor [Homo sapiens] [NCBI NR]
  • gi|12644268|sp|P43897.2|EFTS_HUMAN RecName: Full=Elongation factor Ts, mitochondrial; Short=EF-TsMt; Short=EF-Ts; Flags: Precursor [NCBI NR]
  • Ts translation elongation factor, mitochondrial [HGNC (HUGO)]
  • Elongation factor Ts, mitochondrial OS=Homo sapiens GN=TSFM PE=1 SV=2 [Swiss-Prot]
  • Splice isoform 1 of P43897 [hmr_yeast5_DM3-1_pombe.fasta]
  • Elongation factor Ts, mitochondrial precursor (EF-Ts) (EF-TsMt)gi|4416086|gb|AAD20224.1| elongation factor Ts [Homo sapiens] [nrdb_11152004_Chlamydomonas]
  • Elongation factor Ts, mitochondrial precursor (EF-Ts) (EF-TsMt) [Yateslab_human_na_07-28-2006_reversed.fasta]
  • Tax_Id=9606 Splice Isoform 1 of Elongation factor Ts, mitochondrial precursor [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta]
  • elongation factor Ts [Homo sapiens] [NCBI-RefSeq_human_na_05-03-2007_con_reversed.fasta]
  • Elongation factor Ts, mitochondrial precursor (EF-TsMt) (EF-Ts) [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Ts translation elongation factor, mitochondrial precursor [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Tax_Id=9606 Isoform 1 of Elongation factor Ts, mitochondrial precursor [EBI-IPI_human_3.23_11-02-2006_con_reversed.fasta]
  • Tax_Id=9606 SPLICE ISOFORM 1 OF ELONGATION FACTOR TS, MITOCHONDRIAL PRECURSOR [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=TSFM Isoform 1 of Elongation factor Ts, mitochondrial [human-ipi-250309-contam.fasta]
  • IPI:IPI00021016.3|SWISS-PROT:P43897-1|TREMBL:B4E391|ENSEMBL:ENSP00000388330|REFSEQ:NP_005717|VEGA:OTTHUMP00000168220;OTTHUMP00000202979 Tax_Id=9606 Gene_Symbol=TSFM Isoform 1 of Elongation factor Ts, mitochondrial [ipi.HUMAN.fasta.20090807]
  • [human_BMb_040710_contam.fasta]
  • Tax_Id=9606 Gene_Symbol=TSFM Isoform 1 of Elongation factor Ts, mitochondrial precursor [EBI-IPI_human_3.30_06-28-2007_con_reversed.fasta]
  • elongation factor Ts, mitochondrial isoform 2 precursor [Homo sapiens] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • P43897;Q561V7;Q8TBC2;Q9UQK0; RecName: Full=Elongation factor Ts, mitochondrial; Flags: Precursor; [UniProt_Human_2010_06_06-01-2010_reversed.fasta]
  • Isoform 1 of Elongation factor Ts, mitochondrial OS=Homo sapiens GN=TSFM [011711_HMR.fasta]
  • GeneSymbol=TSFM Synonyms=EFTS|EFTSMT elongation factor Ts, mitochondrial isoform 2 precursor [Homo sapiens] [NCBI-RefSeq_Human_Seno_07-12-2011_reversed.fasta]
  • IPI:IPI00021016.3|SWISS-PROT:P43897-1|TREMBL:E5KS95|ENSEMBL:ENSP00000388330|REFSEQ:NP_005717|VEGA:OTTHUMP00000202979 Tax_Id=9606 Gene_Symbol=TSFM Isoform 1 of Elongation factor Ts, mitochondrial [ipi.HUMAN.20110912.fasta]
  • Elongation factor Ts, mitochondrial GN=TSFM [Doctor+uniprot-HUMAN-120911.fasta]
  • Elongation factor Ts, mitochondrial OS=Homo sapiens GN=TSFM PE=3 SV=1 [uniprot-human-031015-contam.fasta]
    • Organism: Homo sapiens
    Length: 325 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLLRSLRVF LVARTGSYPA GSLLRQSPQP RHTFYAGPRL SASASSKELL MKLRRKTGYS  60
   61 FVNCKKALET CGGDLKQAEI WLHKEAQKEG WSKAAKLQGR KTKEGLIGLL QEGNTTVLVE 120
  121 VNCETDFVSR NLKFQLLVQQ VALGTMMHCQ TLKDQPSAYS KGFLNSSELS GLPAGPDREG 180
  181 SLKDQLALAI GKLGENMILK RAAWVKVPSG FYVGSYVHGA MQSPSLHKLV LGKYGALVIC 240
  241 ETSEQKTNLE DVGRRLGQHV VGMAPLSVGS LDDEPGGEAE TKMLSQPYLL DPSITLGQYV 300
  301 QPQGVSVVDF VRFECGEGEE AAETE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..325] PSI-BLAST 92.0 Crystal Structure of Bos taurus mitochondrial Elongation Factor Tu/Ts Complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • translation elongation factor activity
    		•  2.25105802083938 bayes_pls_golite062009
  • binding
    		•  2.20547750837733 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.19871108544975 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.02040664922388 bayes_pls_golite062009
  • small conjugating protein binding
    		•  0.985424343145381 bayes_pls_golite062009
  • protein binding
    		•  0.975309428909746 bayes_pls_golite062009
  • DNA binding
    		•  0.853492612495239 bayes_pls_golite062009
  • ubiquitin binding
    		•  0.83381750627184 bayes_pls_golite062009
  • catalytic activity
    		•  0.25774924710417 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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