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Protein Overview: DAL2

General Information:
Name(s) found: DAL2 / YIR029W [SGD]
Description(s) found:
Found 25 descriptions.
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  • Allantoicase, converts allantoate to urea and ureidoglycolate in the second step of allantoin degradation; expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 343 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: allantoin catabolic process [IMPLink to PubMed article]
    Molecular Function: allantoicase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFFSLADEA EFKSIIISKN KAVDVIGSKL GGQVVSFSDE WFASAENLIQ PTAPIRDPTR  60
   61 FVHSGAWYDG WETRRHNEME YDWVIIKMGV AAAHIIGGEI DTAFFNGNHA PFVSIEALYD 120
  121 EGEEGNIVED DSRWVEIVEK FECGPSQRHL FVRGNGLTKE RFTHIKLKMY PDGGIARFRL 180
  181 YGRVVPPELK TKDHIIDLAY VCNGAVALKY SDQHFGSVDN LLLPGRGHDM SDGWETKRSR 240
  241 QPGHTDWAVI QLGRESSFIE KIIVDTAHFR GNFPQFITVE GCLKESESSE NTGEGTWVEL 300
  301 VGKSKTGPDK EHVYEIRKSI RVSHVKLTII PDGGVKRIRV WGY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..185] Pfam 102.823909 Allantoicase repeat No confident structure predictions are available.
    2 View Details [186..343] Pfam 87.180456 Allantoicase repeat No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • allantoicase activity
    		•  3.21785739891956 bayes_pls_golite062009
  • binding
    		•  1.56884951913654 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.718803937693854 bayes_pls_golite062009
  • DNA binding
    		•  0.547507778308479 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle