YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SEE1

General Information:
Name(s) found: SEE1 / YIL064W [SGD]
Description(s) found:
Found 25 descriptions.
SHOW ALL
  • Protein with a role in intracellular transport; has sequence similarity to S-adenosylmethionine-dependent methyltransferases of the seven beta-strand family [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 257 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: ribosome biogenesis [RCALink to PubMed article]
    Molecular Function: S-adenosylmethionine-dependent methyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRSEKKSMS SALKNGIMER TQPEKVVQMQ GTADLSTSKL GTKKYWDELY ALELENFRRN  60
   61 PQDTGDCWFS DSDAEQKMID FLVDNIGAYR ISENASVVDL GTGNGHMLFE LHQTEFQGKL 120
  121 VGIDYSEESV KLASNIAEAT GVDNFISFQQ ADIFSGDWKP GKYDIVLDKG TLDAISLSGM 180
  181 KINGKLDVVD VYAGVVERIL KKDGIFLITS CNFTQDELVK IIETDNLKMW KTIKYPVFQF 240
  241 GGVQGATICS VAFVKQN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data SEE1 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..257] PSI-BLAST 35.30103 CmaA1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transferase activity
    		•  1.55708326065545 bayes_pls_golite062009
  • catalytic activity
    		•  0.710731808917009 bayes_pls_golite062009
  • binding
    		•  0.525862599962993 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.352072576393216 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.349480046648587 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle