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Protein Overview: YDR413C

General Information:
Name(s) found: YDR413C [SGD]
Description(s) found:
Found 22 descriptions.
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  • [DUBIOUS] Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the essential uncharacterized ORF YDR412W that is implicated in rRNA processing [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 191 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLHYLLRLL SFAFLWFILR SFLVKYLNFF TLGFFFCFSS TPRNFAYLVA LFMLCLSTFS  60
   61 AFSNLTLFSW AKYSKLSLGS NVSNSTVVES SYISVIAPFF KIGFTLLSLL SLSPSSLSES 120
  121 NPCQDSSDST CKSSVLSFFA SSISASKFKL SLNVFNCSSI TSLRSCRIFC LSSIFLSLSC 180
  181 SLINSCAFFC L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen YDR413C YKL115C 2 Unpublished Fields Lab Data
    View Screen YDR413C ENT4 2 Unpublished Fields Lab Data
    View Screen YDR413C PPZ2 2 Unpublished Fields Lab Data

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..116] ab initio 5.86 No description for 1brrA was found.
    2 View Details [117..191] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle