YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YDR413C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLHYLLRLL SFAFLWFILR SFLVKYLNFF TLGFFFCFSS TPRNFAYLVA LFMLCLSTFS  60
   61 AFSNLTLFSW AKYSKLSLGS NVSNSTVVES SYISVIAPFF KIGFTLLSLL SLSPSSLSES 120
  121 NPCQDSSDST CKSSVLSFFA SSISASKFKL SLNVFNCSSI TSLRSCRIFC LSSIFLSLSC 180
  181 SLINSCAFFC L

Type	Start	End	Confidence
Cytoplasmic	1	11	0.72
Transmembrane Helix	12	36	0.72
Non-Cytoplasmic	37	44	0.78
Transmembrane Helix	45	68	0.91
Cytoplasmic	69	167	0.61
Transmembrane Helix	168	188	0.70
Non-Cytoplasmic	189	191	0.64