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Protein Overview: YDR387C

General Information:
Name(s) found: YDR387C [SGD]
Description(s) found:
Found 26 descriptions.
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  • Putative transporter, member of the sugar porter family; YDR387C is not an essential gene [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 555 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: surfactant activity [TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTDESEDVY SDLYSIISQV TSNTANDIEQ LPYALTFKTS LIFVGATIGG LLFGYDTGVI  60
   61 SGVLLSLKPE DLSLVVLTDV QKELITSSTS VGSFFGSILA FPLADRYGRR ITLAICCSIF 120
  121 ILAAIGMAIA RTLTFLICGR LLVGIAVGVS AQCVPLFLSE ISPSRIRGFM LTLNIIAITG 180
  181 GQLVSYVIAS LMKEIDNSWR YLFALSAIPA ILFLSILDFI PESPRWSISK GDILYTRDSL 240
  241 RMLYPTASTY HVNSKIKQLI IELDKLRLYE DASEPLLVQS QSVIRYMDSS TSGTLSPPNI 300
  301 KRLSSNTERT SNTMSSSSAY LSALRGPAPN GALASNKKKR HRMEPRTIRA LIVGCMLMFF 360
  361 QQITGFNAFM YYAAIIFSKF NIKNPLLPPI LIASTNFIFT FFAMYTMDSL GRRAILLRTI 420
  421 LIMTVGLLLC SVGFGHDQVN LLLISVVIYV AAYASAMGSV PWTCVEFLPL NRRSFGASCI 480
  481 ACTNWLTNAF VSMTYLSTIN TIGDENTMLI FAFFTVCAWF FVYFWYPEVK GLSLEEVGRV 540
  541 FDNGIDVHYV FRTYH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen ARF3 YDR387C 2 Unpublished Fields Lab Data
    View Screen NUP2 YDR387C 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..221]
    [266..530]    		 PSI-BLAST 248.29073 No description for 1ja5A_ was found.
    2 View Details [222..265]
    [531..555]    		 PSI-BLAST 248.29073 No description for 1ja5A_ was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • alcohol transmembrane transporter activity
    		•  6.7545566917184 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  6.7545566917184 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  6.54968363274124 bayes_pls_golite062009
  • glycerol-3-phosphate transmembrane transporter activity
    		•  5.40344495119017 bayes_pls_golite062009
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.54194478414824 bayes_pls_golite062009
  • hexose phosphate transmembrane transporter activity
    		•  3.29248638217469 bayes_pls_golite062009
  • glucose-6-phosphate transmembrane transporter activity
    		•  3.29248638217469 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  2.99050613058546 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  2.99050613058546 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  2.62141276633776 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  2.47557586092261 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.21266150105753 bayes_pls_golite062009
  • solute:hydrogen symporter activity
    		•  2.10485633822652 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.79369588808394 bayes_pls_golite062009
  • monosaccharide transmembrane transporter activity
    		•  1.6904339767429 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • binding
    		•  1.46605775041083 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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