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Protein Overview: YDR109C

General Information:
Name(s) found: YDR109C [SGD]
Description(s) found:
Found 25 descriptions.
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  • Putative kinase [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 715 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: kinase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSRKRQNNM QNETREPAVL SSQETSISRI SPQDPEAKFY VGVDVGTGSA RACVIDQSGN  60
   61 MLSLAEKPIK REQLISNFIT QSSREIWNAV CYCVRTVVEE SGVDPERVRG IGFDATCSLV 120
  121 VVSATNFEEI AVGPDFTNND QNIILWMDHR AMKETEEINS SGDKCLKYVG GQMSVEMEIP 180
  181 KIKWLKNNLE AGIFQDCKFF DLPDYLTFKA TGKENRSFCS AVCKQGFLPV GVEGSDIGWS 240
  241 KEFLNSIGLS ELTKNDFERL GGSLREKKNF LTAGECISPL DKKAACQLGL TEHCVVSSGI 300
  301 IDAYAGWVGT VAAKPESAVK GLAETENYKK DFNGAIGRLA AVAGTSTCHI LLSKNPIFVH 360
  361 GVWGPYRDVL ARGFWAAEGG QSCTGVLLDH LITTHPAFTE LSHMANLAGV SKFEYLNKIL 420
  421 ETLVEKRKVR SVISLAKHLF FYGDYHGNRS PIADPNMRAC IIGQSMDNSI EDLAVMYLSA 480
  481 CEFISQQTRQ IIEVMLKSGH EINAIFMSGG QCRNSLLMRL LADCTGLPIV IPRYVDAAVV 540
  541 FGSALLGAAA SEDFDYTREK RTLKGQKSSQ TKTERFNDSY SSIQKLSMED RNSTNGFVSP 600
  601 HNLQLSTPSA PAKINNYSLP ICTQQPLDKT SEESSKDASL TVGQESLGEG RYNGTSFLWK 660
  661 VMQELTGNAR IVNPNEKTHP DRILLDTKYQ IFLDMIETQR KYRRMVDKVE GSFSR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen APC5 YDR109C 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..302]
    [533..565]    		 PSI-BLAST 190.9897 Glycerol kinase
    2 View Details [303..379] PSI-BLAST 190.9897 Glycerol kinase
    3 View Details [380..532]
    [566..625]    		 PSI-BLAST 190.9897 Glycerol kinase
    4 View Details [626..715] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.49074335090904 bayes_pls_golite062009
  • protein binding
    		•  0.856838411407636 bayes_pls_golite062009
  • catalytic activity
    		•  0.296484721581333 bayes_pls_golite062009
  • unfolded protein binding
    		•  0.25172220535776 bayes_pls_golite062009
  • carbohydrate kinase activity
    		•  0.0904842102388556 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle