YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|108708770, gi...

General Information:
Name(s) found: gi|57222442 [NCBI NR]
gi|108708770 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|57222442|gb|AAW39026.1| putative CCAAT-binding transcription factor [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|108708770|gb|ABF96565.1| CCAAT-box transcription factor complex WHAP3, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • CCAAT-box transcription factor complex WHAP3, putative, expressed [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • putative CCAAT-binding transcription factor [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 312 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIMLLQEMEN HPVQCMAKTN YDFLARNNYP MKQLVQRNSD GDSSPTKSGE SHQEASAVSD  60
   61 SSLNGQHTSP QSDINNNDSC GERDHGTKSV LSLGNTEAAF PPSKFDYNQP FACVSYPYGT 120
  121 DPYYGGVLTG YTSHAFVHPQ ITGAANSRMP LPVDPSVEEP IFVNAKQYNA ILRRRQTRAK 180
  181 LEAQNKAVKG RKPYLHESRH HHAMKRARGS GGRFLTKKEL LEQQQQQQQQ KPPPASAQSP 240
  241 TGRARTSGGA VVLGKNLCPE NSTSCSPSTP TGSEISSISF GGGMLAHQEH ISFASADRHP 300
  301 TMNQNHRVPV MR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..143] deduced N/A No confident structure predictions are available.
    2 View Details [144..234] Pfam 35.853872 No description for PF02045.6 was found. No confident structure predictions are available.
    3 View Details [235..312] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle