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Protein Overview: JMJD4

General Information:
Name(s) found: JMJD4 [HGNC (HUGO)]
Description(s) found:
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  • gi|56204644|emb|CAI23068.1| jumonji domain containing 4 [Homo sapiens] [NCBI NR]
  • gi|239788847|ref|NP_075383.2| jumonji domain containing 4 isoform 1 [Homo sapiens] [NCBI NR]
  • gi|150383500|sp|Q9H9V9.2|JMJD4_HUMAN RecName: Full=JmjC domain-containing protein 4; AltName: Full=Jumonji domain-containing protein 4 [NCBI NR]
  • jumonji domain containing 4 [HGNC (HUGO)]
  • JmjC domain-containing protein 4 OS=Homo sapiens GN=JMJD4 PE=1 SV=2 [Swiss-Prot]
  • Tax_Id=9606 Jumonji domain containing 4 [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta]
  • Tax_Id=9606 Novel protein [EBI-IPI_human_3.12_11-03-2005_con_reversed.fasta]
  • novel protein [Homo sapiens] [NCBI-RefSeq_human_na_05-03-2007_con_reversed.fasta]
  • JmjC domain-containing protein 4 (Jumonji domain-containing protein 4) [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • jumonji domain containing 4 [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=JMJD4 Isoform 1 of JmjC domain-containing protein 4 [human-ipi-250309-contam.fasta]
  • jumonji domain containing 4 isoform 1 [Homo sapiens] [NCBI-RefSeq_human_na_07-13-2009_con_reversed.fasta]
  • IPI:IPI00011132.2|SWISS-PROT:Q9H9V9-1|ENSEMBL:ENSP00000355720|REFSEQ:NP_075383|H-INV:HIT000005853|VEGA:OTTHUMP00000035836 Tax_Id=9606 Gene_Symbol=JMJD4 Isoform 1 of JmjC domain-containing protein 4 [ipi.HUMAN.fasta.20090807]
  • Tax_Id=9606 Jumonji domain-containing protein 4 [IPI_human_3.26.fasta]
  • [human_BMb_040710_contam.fasta]
  • Tax_Id=9606 Gene_Symbol=JMJD4 Isoform 1 of JmjC domain-containing protein 4 ENSG00000081692 IPI00011132 IPI00549346 IPI00409747 [drosphohumanreversed.fasta]
  • jmjC domain-containing protein 4 isoform 1 [Homo sapiens] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • JmjC domain-containing protein 4 OS=Homo sapiens GN=JMJD4 PE=2 SV=2 [UniProtHuman070710.fasta]
  • Q9H9V9;Q5TBZ1;Q5TBZ6;Q9H970; RecName: Full=JmjC domain-containing protein 4; AltName: Full=Jumonji domain-containing protein 4; [UniProt_Human_2010_06_06-01-2010_reversed.fasta]
  • Isoform 1 of JmjC domain-containing protein 4 OS=Homo sapiens GN=JMJD4 [011711_HMR.fasta]
  • GeneSymbol=JMJD4 Synonyms=FLJ12517|MGC129896 jmjC domain-containing protein 4 isoform 1 [Homo sapiens] [NCBI-RefSeq_Human_Seno_07-12-2011_reversed.fasta]
  • JmjC domain-containing protein 4 GN=JMJD4 [Doctor+uniprot-HUMAN-120911.fasta]
    • Organism: Homo sapiens
    Length: 463 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAGPEPQAL AGQKRGALRL LVPRLVLTVS APAEVRRRVL RPVLSWMDRE TRALADSHFR  60
   61 GLGVDVPGVG QAPGRVAFVS EPGAFSYADF VRGFLLPNLP CVFSSAFTQG WGSRRRWVTP 120
  121 AGRPDFDHLL RTYGDVVVPV ANCGVQEYNS NPKEHMTLRD YITYWKEYIQ AGYSSPRGCL 180
  181 YLKDWHLCRD FPVEDVFTLP VYFSSDWLNE FWDALDVDDY RFVYAGPAGS WSPFHADIFR 240
  241 SFSWSVNVCG RKKWLLFPPG QEEALRDRHG NLPYDVTSPA LCDTHLHPRN QLAGPPLEIT 300
  301 QEAGEMVFVP SGWHHQVHNL DDTISINHNW VNGFNLANMW RFLQQELCAV QEEVSEWRDS 360
  361 MPDWHHHCQV IMRSCSGINF EEFYHFLKVI AEKRLLVLRE AAAEDGAGLG FEQAAFDVGR 420
  421 ITEVLASLVA HPDFQRVDTS AFSPQPKELL QQLREAVDAA AAP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..331] PSI-BLAST 39.69897 Hypoxia-inducible factor HIF ihhibitor (FIH1)
    2 View Details [332..463] FFAS03 1.39 No description for 2yu1A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.642934433547624 bayes_pls_golite062009
  • protein binding
    		•  0.0678897223734009 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.68

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle