| Protein: | JMJD4 |
| Organism: | Homo sapiens |
| Length: | 463 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for JMJD4.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..463] | [1..463] |
|
|
0.0 | [1..463] | [1..463] |
|
|
0.0 | [1..463] | [1..463] |
|
|
0.0 | [47..462] | [1..425] |
|
|
0.0 | [47..462] | [1..426] |
|
Region A: Residues: [1-331] |
1 11 21 31 41 51
| | | | | |
1 MRAGPEPQAL AGQKRGALRL LVPRLVLTVS APAEVRRRVL RPVLSWMDRE TRALADSHFR 60
61 GLGVDVPGVG QAPGRVAFVS EPGAFSYADF VRGFLLPNLP CVFSSAFTQG WGSRRRWVTP 120
121 AGRPDFDHLL RTYGDVVVPV ANCGVQEYNS NPKEHMTLRD YITYWKEYIQ AGYSSPRGCL 180
181 YLKDWHLCRD FPVEDVFTLP VYFSSDWLNE FWDALDVDDY RFVYAGPAGS WSPFHADIFR 240
241 SFSWSVNVCG RKKWLLFPPG QEEALRDRHG NLPYDVTSPA LCDTHLHPRN QLAGPPLEIT 300
301 QEAGEMVFVP SGWHHQVHNL DDTISINHNW V
|
| Detection Method: |  |
| Confidence: | 39.69897 |
| Match: | 1mzeA |
| Description: | Hypoxia-inducible factor HIF ihhibitor (FIH1) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.642934433547624 | bayes_pls_golite062009 |
| protein binding | 0.0678897223734009 | bayes_pls_golite062009 |
|
Region A: Residues: [332-463] |
1 11 21 31 41 51
| | | | | |
1 NGFNLANMWR FLQQELCAVQ EEVSEWRDSM PDWHHHCQVI MRSCSGINFE EFYHFLKVIA 60
61 EKRLLVLREA AAEDGAGLGF EQAAFDVGRI TEVLASLVAH PDFQRVDTSA FSPQPKELLQ 120
121 QLREAVDAAA AP
|
| Detection Method: | |
| Confidence: | 1.39 |
| Match: | 2yu1A |
| Description: | No description for 2yu1A was found. |
