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Protein Overview: gi|62320544, gi|...

General Information:
Name(s) found: gi|62320544 [NCBI NR]
gi|145362223 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|62320544|dbj|BAD95139.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|145362223|ref|NP_973754.2| targeting protein-related [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 758 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: spindle assembly [IMP]
    Molecular Function: microtubule binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEATAEESVS TLVTTMVDET YEFLAPRWFD FVNGETEDES RRAELWFQSA LSCAPSPSVP  60
   61 RIKARRSFKV EAMCNFNEAE EETLKDKEPL EPVVPIVSLQ SQPSQAKKAE VAPSKASTVK 120
  121 PSRISSKDAE VNNKTVDASD PTTEPIEDKE NIAPACTPKP PMQFSLGAKS VDLKKQQTAR 180
  181 KIASLLKNPS TLRPKNQSQA KGSHQKSVKG ETNLNNIAST TNLIQENQAI KRQKLDDGKS 240
  241 RQILNPKPAT LLHKTRNGLV NTGFNLCPSV TKHTPKENRK VYVREQIAPF VSTAELMKKF 300
  301 QTSTRDLFVQ NRPKLTLTRP KEPEFVTSQR ARPLRVKSSA ELEEEMLAKI PKFKARPVNK 360
  361 KILAAPALPA PQRSTPHLPE FQEFHLQTMA RANQHAETSS IASTEVSKQH NDQKHHLTEP 420
  421 KSPVLQTMLR ARPTIAKTTA ELEQEELEKA PKFKAKPLNK KIFESKGEMG IFCNTKKHIT 480
  481 IPQEFHFATD ERISRPESVL DIFDKLSLNS ESCHEKPLPR NTAPNPFNLK TEERGAEKEK 540
  541 KFYMELMYKK LGDVKARVPK ANPYPYTTDY PVVPPKPEPK QCTQPEPFQL ESLVRHEEEM 600
  601 RREREERRRM ETEEAQKRLF KAQPVIKEDP IPVPEKVRMP LTEIQEFNLH VEHRAVERAD 660
  661 FDHKIKEKEN QYKRYREESE AAKMVEEERA LKQMRKTMVP HARPVPNFNK PFLPQKSNKG 720
  721 TTKAKSPNLR VIKRTERRTM MARPTISAAT SASAGQMR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..155] MSA 1.201995 View MSA. No confident structure predictions are available.
    2 View Details [156..324] deduced N/A No confident structure predictions are available.
    3 View Details [325..447] deduced N/A No confident structure predictions are available.
    4 View Details [448..550] deduced N/A No confident structure predictions are available.
    5 View Details [551..646] deduced N/A No confident structure predictions are available.
    6 View Details [647..758] Pfam 20.886057 No description for PF06886.3 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle