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Protein Overview: gi|56784626, gi|...

General Information:
Name(s) found: gi|56784626 [NCBI NR]
gi|115441423 [NCBI NR]
gi|113534522 [NCBI NR]
Description(s) found:
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  • gi|56784626|dbj|BAD81673.1| glycogenin-like protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115441423|ref|NP_001044991.1| Os01g0880200 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113534522|dbj|BAF06905.1| Os01g0880200 [Oryza sativa Japonica Group] [NCBI NR]
  • glycogenin-like protein [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • Os01g0880200 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 635 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSLETTNTR YRPAGAADDT AKRRTQKSKS FKEVEKFDVF VLEKSSGCKF RSLQLLLFAI  60
   61 MSAAFLTLLY TPSVYDHQMQ SSSRFVSGWI WDKTIPDPRY VSSLGVQWED VYKTVENLND 120
  121 GERKLKVGLL NFNSTEIGSW TQLLPDSDFS IIRLEHAKES ITWQTLYPEW IDEEEETEIP 180
  181 SCPSLPDPIF PRGTHFDVVA VKLPCTRAGG WSRDVARLHL QLSAAKVAVT ASRGNRGIHV 240
  241 LFVTDCFPIP NLFSCKNLVK HEGNAWMYKP DLKALREKLR LPVGSCELAV PLKAKARLYS 300
  301 VDRRREAYAT ILHSASEYVC GAITAAQSIR QAGSTRDFVI LVDETISNHH RKGLEAAGWK 360
  361 VRIIQRIRNP KAERDAYNEW NYSKFRLWQL TDYDKIIFID ADLLILRNVD FLFAMPEITA 420
  421 TGNNATLFNS GVMVIEPSNC TFQLLMDHIN EITSYNGGDQ GYLNEIFTWW HRIPKHMNFL 480
  481 KHFWEGDEEE VKVKKTRLFG ADPPILYVLH YLGLKPWLCF RDYDCNWNNP ILREFASDVA 540
  541 HARWWKVHDK MPKKLQHYCL LRSRQKAGLE WDRRQAEKAN FTDGHWRRNI TDPRLKTCFE 600
  601 KFCFWESMLW HWGESKNSTK ENPVPATPTA SLTSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..192] deduced N/A No confident structure predictions are available.
    2 View Details [193..304] deduced N/A No confident structure predictions are available.
    3 View Details [305..635] PSI-BLAST 61.69897 apo form of a mutant of glycogenin in which Asp159 is replaced by Asn

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  1.3567084433464 bayes_pls_golite062009
  • transferase activity
    		•  1.04375515050786 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle