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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56784626, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSLETTNTR YRPAGAADDT AKRRTQKSKS FKEVEKFDVF VLEKSSGCKF RSLQLLLFAI  60
   61 MSAAFLTLLY TPSVYDHQMQ SSSRFVSGWI WDKTIPDPRY VSSLGVQWED VYKTVENLND 120
  121 GERKLKVGLL NFNSTEIGSW TQLLPDSDFS IIRLEHAKES ITWQTLYPEW IDEEEETEIP 180
  181 SCPSLPDPIF PRGTHFDVVA VKLPCTRAGG WSRDVARLHL QLSAAKVAVT ASRGNRGIHV 240
  241 LFVTDCFPIP NLFSCKNLVK HEGNAWMYKP DLKALREKLR LPVGSCELAV PLKAKARLYS 300
  301 VDRRREAYAT ILHSASEYVC GAITAAQSIR QAGSTRDFVI LVDETISNHH RKGLEAAGWK 360
  361 VRIIQRIRNP KAERDAYNEW NYSKFRLWQL TDYDKIIFID ADLLILRNVD FLFAMPEITA 420
  421 TGNNATLFNS GVMVIEPSNC TFQLLMDHIN EITSYNGGDQ GYLNEIFTWW HRIPKHMNFL 480
  481 KHFWEGDEEE VKVKKTRLFG ADPPILYVLH YLGLKPWLCF RDYDCNWNNP ILREFASDVA 540
  541 HARWWKVHDK MPKKLQHYCL LRSRQKAGLE WDRRQAEKAN FTDGHWRRNI TDPRLKTCFE 600
  601 KFCFWESMLW HWGESKNSTK ENPVPATPTA SLTSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle