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Protein Overview: psq-PL

General Information:
Name(s) found: psq-PL / FBpp0100068 [FlyBase]
Description(s) found:
Found 9 descriptions.
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  • The gene pipsqueak is referred to in FlyBase by the symbol Dmel\psq (CG2368, FBgn0004399). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:6445409..6503753. It has the cytological map location 47A13-47B1. It is reported to have molecular function</span>: DNA binding. There is experimental evidence that it is involved in the biological process</span>: olfactory behavior; imaginal disc-derived wing morphogenesis. 79 alleles are reported. The phenotypes of these alleles are annotated with 25 unique terms, many of which group under: embryonic abdomen; embryonic segment; organ system; embryonic tagma; peripheral nervous system; female germline cyst; external compound sense organ; adult segment; nervous system; adult mesothoracic segment. It has 12 annotated transcripts and 12 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 535 amino acids

    Gene Ontology:
    Cellular Component: nucleus [TAS]
    Biological Process: gene silencing [TAS]
    imaginal disc-derived wing morphogenesis [IMP]
    pole plasm assembly [NAS]
    olfactory behavior [IMP]
    Molecular Function: DNA binding [IEA][NAS][TAS]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVRGHQYF SLRWNNYQNT MTSVFQQLRE DLSFVDVTLS CEHGSLKAHK VVLSACSTYF  60
   61 QKLLLENPCK HPTIILPADI IFTDLKTIID FVYRGEIDVT ESELQGLLRT AEQLKIKGLC 120
  121 ETAENADDLN DAATATITVS ENIQQAVVGN IVNAAIVPGA PSPSLEQQQQ HHQQQQQQQA 180
  181 QEQHQQQQVH AQQQQQQQQQ INAALLTQHG VSSGSVSLSG QLLSSSASGS SGSLAGGQQA 240
  241 SQTPSGLQPT PRKSRLKRSK SPDLSSGGGA GSSGGSSSGS TQQQPQPAHH HHPQTILIQG 300
  301 QNPNSIVSLQ QTADGNYIPV SGSGDDSDAE DHEHEHNHGH GHGHGGHTHG HGHSHEHSHD 360
  361 HEHEHKPNKI CKTEHSVASP ASNSSSASNN AAGVSGVTST GQAIVTQIVV ARDGKDTKNM 420
  421 TSLGMGMVSW LASFGLVSKS QQISQLARDR SQIGSPQARM NINFANLTIP ISLSTRIWFA 480
  481 CRTAACWACP WDSWTSHPSH QHHLPPQSPS RSTSICPATL ARTRAIYQIP PNRSI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..127] PSI-BLAST 30.0 No description for 2nn2A was found.
    2 View Details [128..373] FFAS03 1.13 30S subunit
    3 View Details [374..535] FFAS03 1.64 No description for 2qfiA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.73

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle