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Protein Overview: gi|56236062, gi|...

General Information:
Name(s) found: gi|79375455 [NCBI NR]
gi|71905461 [NCBI NR]
gi|60547659 [NCBI NR]
gi|58531340 [NCBI NR]
gi|56236062 [NCBI NR]
Description(s) found:
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  • gi|79375455|ref|NP_176975.2| iron ion binding / oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [Arabidopsis thaliana] [NCBI NR]
  • gi|71905461|gb|AAZ52708.1| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • gi|60547659|gb|AAX23793.1| hypothetical protein At1g68080 [Arabidopsis thaliana] [NCBI NR]
  • gi|58531340|gb|AAW78592.1| At1g68080 [Arabidopsis thaliana] [NCBI NR]
  • gi|56236062|gb|AAV84487.1| At1g68080 [Arabidopsis thaliana] [NCBI NR]
  • Tax_Id=3702 Similar to leprecan [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | chr1:25521193-25522903 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • expressed protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g68080 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein At1g68080 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:25517530-25519240 FORWARD LENGTH=389 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase domain-containing protein OS=Arabidopsis thaliana GN=At1g68080 PE=2 SV=1 [ARATH-contam.fasta]
  • 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein OS=Arabidopsis thaliana GN=At1g68080 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 389 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: protein metabolic process [IEA]
    Molecular Function: iron ion binding [IEA]
    oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEKEHPRLI LHNFLSPAEC KELELIHKSS STIGYRPNVF STTLSHLIAT NSPHLIIPFV  60
   61 SIRERLKEKI EETFGCEYEL FIEFTGLISW CKGASIGWHS DDNRSYLKQR DFAAVCYLNS 120
  121 YEKDFIGGLF RFQSGEPVTV APSAGDVIMY TADDRNIHSV DEVTDGERLT LALWFSRDSS 180
  181 HDEDSKLLSR LSQCTSHEVC LPLPASTNMY WFCPHQDGSN QNIGFDVCVA RLHLLGFDVH 240
  241 SLQGEDHSTD ASEQLMGPLQ LAKGGKLLTR KFANILHALQ VVQFYHWKAS ELVTSNVEND 300
  301 TLEEVKAMSH SQLETINALK SVFLLDENLV ATTFGYSCSG EDRKDSLDLT GIALAVTSWE 360
  361 EYSCKLLKEL LSSLPQWKTY QTIHKVESD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..215] PSI-BLAST 34.221849 No description for 3dkqA was found.
    2 View Details [216..389] MSA 1.035995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle