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Protein Overview: gi|109507081, gi...

General Information:
Name(s) found: gi|62664161 [NCBI NR]
gi|157820569 [NCBI NR]
gi|149017124 [NCBI NR]
gi|109507081 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|62664161|ref|XP_344660.2| PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide D isoform 1 [Rattus norvegicus] [NCBI NR]
  • gi|157820569|ref|NP_001102356.1| polymerase (RNA) II (DNA directed) polypeptide D [Rattus norvegicus] [NCBI NR]
  • gi|149017124|gb|EDL76175.1| polymerase (RNA) II (DNA directed) polypeptide D (predicted) [Rattus norvegicus] [NCBI NR]
  • gi|109507081|ref|XP_001059312.1| PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide D isoform 1 [Rattus norvegicus] [NCBI NR]
    • Organism: Rattus norvegicus
    Length: 142 amino acids

    Gene Ontology:
    Cellular Component: nucleus [UNKNOWN]
    nucleoplasm [UNKNOWN]
    DNA-directed RNA polymerase II, core complex [UNKNOWN]
    Biological Process: RNA splicing [UNKNOWN]
    transcription [IEA]
    transcription from RNA polymerase II promoter [UNKNOWN]
    cellular metabolic process [IEA]
    transcription initiation from RNA polymerase II promoter [UNKNOWN]
    RNA elongation from RNA polymerase II promoter [UNKNOWN]
    Molecular Function: nucleotide binding [IEA]
    DNA-directed RNA polymerase activity [UNKNOWN][IEA]
    catalytic activity [IEA]
    protein kinase activity [UNKNOWN]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAGGSDPRA GDVEEDASQL IFPKEFETAE TLLNSEVHML LEHRKQQNES AEDEQELSEV  60
   61 FMKTLNYTAR FSRFKNRETI ASVRSLLLQK KLHKFELACL ANLCPETAEE SKALIPSLEG 120
  121 RFEDEELQQI LDDIQTKRSF QY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..142] PSI-BLAST 46.0 Subunits Rpb4 and Rpb7 of human RNA polymerase II


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle