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Protein Overview: gi|121630524, gi...

General Information:
Name(s) found: gi|75816131 [NCBI NR]
gi|121727146 [NCBI NR]
gi|121630524 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|75816131|ref|ZP_00746610.1| COG0284: Orotidine-5'-phosphate decarboxylase [Vibrio cholerae V52] [NCBI NR]
  • gi|121727146|ref|ZP_01680320.1| orotidine 5`-phosphate decarboxylase [Vibrio cholerae V52] [NCBI NR]
  • gi|121630524|gb|EAX62916.1| orotidine 5`-phosphate decarboxylase [Vibrio cholerae V52] [NCBI NR]
    • Organism: Vibrio cholerae V52
    Length: 231 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDPKVIVAL DYDNLADALA FVDKIDPSTC RLKVGKEMFT LFGPDFVREL HKRGFSVFLD  60
   61 LKFHDIPNTC SKAVKAAAEL GVWMVNVHAS GGERMMAASR EILEPYGKER PLLIGVTVLT 120
  121 SMESADLQGI GILSAPQDHV LRLATLTKNA GLDGVVCSAQ EASLLKQHLG REFKLVTPGI 180
  181 RPAGSEQGDQ RRIMTPAQAI ASGSDYLVIG RPITQAAHPE VVLEEINSSL V

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..231] PSI-BLAST 56.69897 Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • orotidine-5'-phosphate decarboxylase activity
    		•  2.87717797280068 bayes_pls_golite062009
  • catalytic activity
    		•  2.44231061702877 bayes_pls_golite062009
  • ribulose-phosphate 3-epimerase activity
    		•  0.982517927791965 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  0.83446736141993 bayes_pls_golite062009
  • orotate phosphoribosyltransferase activity
    		•  0.108467338662618 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle