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Protein Overview: gi|57167067, gi|...

General Information:
Name(s) found: gi|57238263 [NCBI NR]
gi|57167067 [NCBI NR]
Description(s) found:
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  • gi|57238263|ref|YP_178656.1| 2-oxoglutarate-acceptor oxidoreductase subunit OorB [Campylobacter jejuni RM1221] [NCBI NR]
  • gi|57167067|gb|AAW35846.1| 2-oxoglutarate:acceptor oxidoreductase, beta subunit [Campylobacter jejuni RM1221] [NCBI NR]
  • ferrodoxin oxidoreductase beta subunit [Campylobacter jejuni RM1221] [nr-271106-contam.fasta]
  • 2-oxoglutarate:acceptor oxidoreductase, beta subunit [Campylobacter jejuni RM1221] [nr-271106-contam.fasta]
    • Organism: Campylobacter jejuni RM1221
    Length: 281 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: 2-oxoglutarate synthase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFNYDEYLR VDKMPTQWCW GCGDGVVLKC IIRAIEKLGW NMDDVCLVSG IGCSGRMSSY  60
   61 VNCNTVHTTH GRAIAYATGI KLANPSKHVI VVSGDGDTLA IGGNHTIHGC RRNIDLTHIV 120
  121 INNFIYGLTN SQTSPTTPKG FYTVTAQFGN IDPNFDACEL TKAAGASFVA RGNVIEANKL 180
  181 ENLIYKALAH KGYSFVDVFS NCHINLGRKN KMGEAVAMLD WIKNRVVDKA KFESMDFEER 240
  241 KDKFPTGILH EDNSQPEYCH AYEEVRRAAK EKRMVDLGAL K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..281] PSI-BLAST 34.0 Transketolase (TK), Pyr module; Transketolase (TK), PP module; Transketolase (TK), C-domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.62581591393304 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.76278237247276 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors
    		•  1.33446932713773 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle