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Protein Overview: gi|126196509, gi...

General Information:
Name(s) found: gi|84324767 [NCBI NR]
gi|254243131 [NCBI NR]
gi|194554116 [NCBI NR]
gi|126196509 [NCBI NR]
Description(s) found:
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  • gi|84324767|ref|ZP_00972822.1| COG0242: N-formylmethionyl-tRNA deformylase [Pseudomonas aeruginosa 2192] [NCBI NR]
  • gi|254243131|ref|ZP_04936453.1| polypeptide deformylase [Pseudomonas aeruginosa 2192] [NCBI NR]
  • gi|194554116|ref|YP_002089143.1| polypeptide deformylase [Pseudomonas aeruginosa 2192] [NCBI NR]
  • gi|126196509|gb|EAZ60572.1| polypeptide deformylase [Pseudomonas aeruginosa 2192] [NCBI NR]
  • COG0242: N-formylmethionyl-tRNA deformylase [Pseudomonas aeruginosa 2192] [nr-271106-contam.fasta]
    • Organism: Pseudomonas aeruginosa 2192
    Length: 168 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAILNILEFP DPRLRTIAKP VEVVDDAVRQ LIDDMFETMY EAPGIGLAAT QVNVHKRIVV  60
   61 MDLSEDKSEP RVFINPEFEP LTEDMDQYQE GCLSVPGFYE NVDRPQKVRI KALDRDGNPF 120
  121 EEVAEGLLAV CIQHECDHLN GKLFVDYLST LKRDRIRKKL EKQHRQQA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..168] PSI-BLAST 72.045757 Peptide deformylase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.58820956037645 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
    		•  2.29341894440799 bayes_pls_golite062009
  • peptide deformylase activity
    		•  2.09701270257336 bayes_pls_golite062009
  • hydrolase activity
    		•  1.74603757697733 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  1.59643176725105 bayes_pls_golite062009
  • formylmethionine deformylase activity
    		•  0.90550535791718 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle