YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|254245186, gi...

General Information:
Name(s) found: gi|84322708 [NCBI NR]
gi|254245186 [NCBI NR]
gi|194556171 [NCBI NR]
gi|126198564 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|84322708|ref|ZP_00970792.1| COG3724: Succinylarginine dihydrolase [Pseudomonas aeruginosa 2192] [NCBI NR]
  • gi|254245186|ref|ZP_04938508.1| succinylarginine dihydrolase [Pseudomonas aeruginosa 2192] [NCBI NR]
  • gi|194556171|ref|YP_002091198.1| succinylarginine dihydrolase [Pseudomonas aeruginosa 2192] [NCBI NR]
  • gi|126198564|gb|EAZ62627.1| succinylarginine dihydrolase [Pseudomonas aeruginosa 2192] [NCBI NR]
  • COG3724: Succinylarginine dihydrolase [Pseudomonas aeruginosa 2192] [nr-271106-contam.fasta]
    • Organism: Pseudomonas aeruginosa 2192
    Length: 448 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAHEVNFDG LVGPTHNYGG LSYGNVASQS NSQAVSNPKE AAKQGLAKMK ALMEMGFKQG  60
   61 VLAPQARPDT AALRSLGFSG SDEEVIRRAA KEAMPLLAAC SSASSMWTAN AATVSPSADT 120
  121 ADGRVHFTAA NLNCKFHRSI EHPTTSRVLA AMFNDERHFA HHAALPAVSQ FGDEGAANHT 180
  181 RFCKDYGDAG VEFFVFGRSA FDSRFPAPQR YPARQTLEAC QAVARLHGLS EAGVVYAQQN 240
  241 PAVIDQGVFH NDVISVGNGE VLFHHEDAFL DTEKVLAELH DKLGRRGGRF RAICVPRDQV 300
  301 AVEDAVKSYL FNSQLLSKAD GSMLLVVPEE CRNNPRVWNY LDQLTGDDGP IREVKVFDLK 360
  361 QSMQNGGGPA CLRLRVALQE RELAAVNPGV IMSAGLYDTL VAWVDRHYRD RLSETDLADP 420
  421 QLLLECRTAL DELTQILKLG SVYSFQLD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..448] PSI-BLAST 1000.0 Crystal Structure of N-Succinylarginine Dihydrolase, AstB, bound to Substrate and Product, an Enzyme from the Arginine Catabolic Pathway of Escherichia coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
    		•  1.80356530015579 bayes_pls_golite062009
  • N-succinylarginine dihydrolase activity
    		•  1.79190392361658 bayes_pls_golite062009
  • catalytic activity
    		•  1.2603605268935 bayes_pls_golite062009
  • protein-arginine deiminase activity
    		•  1.23765841785254 bayes_pls_golite062009
  • arginine deiminase activity
    		•  1.06118411192651 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  0.89634749643842 bayes_pls_golite062009
  • hydrolase activity
    		•  0.79014898516962 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle