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Protein Overview: gi|75238336, gi|...

General Information:
Name(s) found: gi|75238336 [NCBI NR]
gi|193068035 [NCBI NR]
gi|192958655 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|75238336|ref|ZP_00722335.1| COG0437: Fe-S-cluster-containing hydrogenase components 1 [Escherichia coli E110019] [NCBI NR]
  • gi|193068035|ref|ZP_03049000.1| formate dehydrogenase-O, iron-sulfur subunit [Escherichia coli E110019] [NCBI NR]
  • gi|192958655|gb|EDV89093.1| formate dehydrogenase-O, iron-sulfur subunit [Escherichia coli E110019] [NCBI NR]
    • Organism: Escherichia coli E110019
    Length: 300 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYQSQDIIR RSATNGLTPA PQARDFQEEV AKLIDVTTCI GCKACQVACS EWNDIRDTVG  60
   61 NNIGVYDNPN DLSAKSWTVM RFSEVEQNDK LEWLIRKDGC MHCSDPGCLK ACPAEGAIIQ 120
  121 YANGIVDFQS EQCIGCGYCI AGCPFDIPRL NPEDNRVYKC TLCVDRVVVG QEPACVKTCP 180
  181 TGAIHFGTKE SMKTLASERV AELKTRGYDN AGLYDPAGVG GTHVMYVLHH ADKPNLYHGL 240
  241 PENPEISETV KFWKGIWKPL AAVGFAATFA ASIFHYVGVG PNRADEEENN LHEEKDEERK 300
  301

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..300] PSI-BLAST 71.39794 Formate dehydrogenase N, iron-sulfur (beta) subunit; Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • formate dehydrogenase activity
    		•  10.9674358961972 bayes_pls_golite062009
  • oxidoreductase activity
    		•  5.98361135786786 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
    		•  5.77927347135001 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors
    		•  5.39747453448396 bayes_pls_golite062009
  • electron carrier activity
    		•  5.05393703018095 bayes_pls_golite062009
  • NADH dehydrogenase activity
    		•  3.13953145151561 bayes_pls_golite062009
  • NADH dehydrogenase (ubiquinone) activity
    		•  2.76338281383262 bayes_pls_golite062009
  • NADH dehydrogenase (quinone) activity
    		•  2.70037803782769 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  2.09041948600744 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  1.80621486978907 bayes_pls_golite062009
  • 4 iron, 4 sulfur cluster binding
    		•  1.5619384041388 bayes_pls_golite062009
  • iron-sulfur cluster binding
    		•  1.30496569995148 bayes_pls_golite062009
  • metal cluster binding
    		•  1.30496569995148 bayes_pls_golite062009
  • catalytic activity
    		•  0.488483980994331 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle