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Protein Overview: gi|79314295, gi|...

General Information:
Name(s) found: gi|98962053 [NCBI NR]
gi|79314295 [NCBI NR]
Description(s) found:
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  • gi|98962053|gb|ABF59356.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|79314295|ref|NP_001030813.1| tRNA-intron endonuclease [Arabidopsis thaliana] [NCBI NR]
  • Tax_Id=3702 Similar to tRNA-splicing endonuclease [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | similar to ATSEN1 (SPLICING ENDONUCLEASE 1), tRNA-intron endonuclease [Arabidopsis thaliana] (TAIR:AT3G45590.1); similar to ATSEN1 (SPLICING ENDONUCLEASE 1) [Arabidopsis thaliana] (TAIR:AT3G45590.2); similar to unnamed protein product [Vitis [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | similar to ATSEN1 (SPLICING ENDONUCLEASE 1), tRNA-intron endonuclease [Arabidopsis thaliana] (TAIR:AT3G45590.1); similar to ATSEN1 (SPLICING ENDONUCLEASE 1) [Arabidopsis thaliana] (TAIR:AT3G45590.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO21788.1); contains domain PTHR21227 (PTHR21227) | chr3:16739895-16740251 FORWARD [TAIR_A_Thaliana_na_04-12-2008_reversed.fasta]
  • | Symbols: | tRNA-intron endonucleases | chr3:16728910-16729266 FORWARD LENGTH=118 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Uncharacterized protein At3g45577.1 OS=Arabidopsis thaliana GN=At3g45577 PE=4 SV=1 [ARATH-contam.fasta]
  • tRNA-intron endonuclease OS=Arabidopsis thaliana GN=At3g45577 PE=4 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 118 amino acids

    Gene Ontology:
    Cellular Component: tRNA-intron endonuclease complex [IEA]
    Biological Process: tRNA splicing, via endonucleolytic cleavage and ligation [IEA]
    Molecular Function: tRNA-intron endonuclease activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSQTIILLC RERLISMAPR WKWALGFLSS CNVFLSEQAE LLDRYCFGRL VFGAEKDKRW  60
   61 IQLSYEEAFF LFYKLKCIKI SLHGRSLVNG VDLWRSIRSF KPNFTILYKA YSHLRSKN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle