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Protein Overview: YSL3_ARATH

General Information:
Name(s) found: YSL3_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|88043720|gb|ABD38920.1| metal-nicotianamine transporter YSL3 [Arabidopsis thaliana] [NCBI NR]
  • gi|145359208|ref|NP_200167.2| YSL3 (YELLOW STRIPE LIKE 3); oligopeptide transporter [Arabidopsis thaliana] [NCBI NR]
  • gi|122197349|sp|Q2EF88.1|YSL3_ARATH RecName: Full=Metal-nicotianamine transporter YSL3; AltName: Full=Protein YELLOW STRIPE LIKE 3; Short=AtYSL3 [NCBI NR]
  • Metal-nicotianamine transporter YSL3 OS=Arabidopsis thaliana GN=YSL3 PE=2 SV=1 [Swiss-Prot]
  • | Symbols: YSL3 | YSL3 (YELLOW STRIPE LIKE 3); oligopeptide transporter | chr5:21773307-21776002 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • metal-nicotianamine transporter YSL3 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: YSL3, ATYSL3 | YELLOW STRIPE like 3 | chr5:21756081-21758776 FORWARD LENGTH=675 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • | Symbols: YSL3 | YELLOW STRIPE like 3 | chr5:21756081-21758776 FORWARD LENGTH=675 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 675 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: oligopeptide transport [ISS]
    response to nematode [IEP]
    Molecular Function: oligopeptide transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSMMMEREG RNEIEREVID DLEETQNEGD DFKSIPPWKE QITFRGIVAS LIIGIIYSVI  60
   61 VMKLNLTTGL VPNLNVSAAL LAFVFLRSWT KLLTKAGIVT KPFTKQENTV VQTCAVACYS 120
  121 IAVGGGFGSY LLGLNRITYE QSGGTHTDGN YPEGTKEPGI GWMTAFLFFT CFVGLLALVP 180
  181 LRKIMIIDYK LTYPSGTATA VLINGFHTPK GNKMAKKQVF GFVKYFSFSF IWAFFQWFFS 240
  241 GGTECGFIQF PTFGLEALKN TFYFDFSMTY VGAGMICPHI VNISLLFGAV LSWGIMWPLI 300
  301 KGLKGDWFPS TLPENSMKSL NGYKVFISIS LILGDGLYQF IKILFKTGIN MYVKLNNRNS 360
  361 GKSNSEKDKQ SIADLKRDEI FVRDSIPLWV AAVGYAAFSV VSIIAIPIMF PELKWYFIVV 420
  421 AYMLAPSLGF SNAYGAGLTD MNMAYNYGKV ALFILAAMAG KQNGVVAGLV GCGLIKSIVS 480
  481 ISSDLMHDFK TGHLTLTSPR SMLVSQAIGT AIGCVVAPLT FFLFYKAFDV GNQEGEYKAP 540
  541 YALVYRNMAI LGVEGFSALP QHCLQLCYGF FAFAVAANLV RDRLPDKIGN WVPLPMAMAV 600
  601 PFLVGGYFAI DMCVGSLIVF AWNMRDRVKA GLMVPAVASG LICGDGLWIL PSSVLALAGV 660
  661 RPPICMGFMP SKYSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..68] MSA 2.182994 View MSA. No confident structure predictions are available.
    2 View Details [69..371] MSA 1.208969 View MSA. No confident structure predictions are available.
    3 View Details [372..526] deduced N/A No confident structure predictions are available.
    4 View Details [527..675] MSA 3.216991 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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