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Protein Overview: CE39547

General Information:
Name(s) found: CE39547 [WormBase]
Description(s) found:
Found 12 descriptions.
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  • WBGene00015092 locus:mrpl-47 status:Confirmed UniProt:Q2L6V2 protein_id:CCD61571.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 234 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial ribosome [IEALink to PubMed article]
    Biological Process: nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    determination of adult lifespan [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed article]
    translation [IEALink to PubMed article]
    Molecular Function: structural constituent of ribosome [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNFDFTNFH SLRFFKSTMW RSLPSLVSSA VRSQNAVNTR FSSTMKQFFD DEANFGKAEL  60
   61 RPKHRPGRSW TAEELRLKSN SDLHKLWYVC LKERNMLITM KKAHTSRARN MPNPERLDRV 120
  121 HETMDRIESV VHERNDAVFR LETGESAAPR KRTITSFAGF TYQKQATEHF APPQLGQKEY 180
  181 ETPYLDDDAY VMQKLWQEKE FMKNRDRLDD EKRRAARTED MDRFKRGAPR VFNR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..157] FFAS03 1.14 70S ribosome functional complex
    2 View Details [158..234] MSA 2.029994 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  4.70571586133606 bayes_pls_golite062009
  • structural molecule activity
    		•  4.5930470522379 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.65

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle