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Protein Overview: sma-4

General Information:
Name(s) found: sma-4 / CE39618 [WormBase]
Description(s) found:
Found 12 descriptions.
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  • WBGene00004858 locus:sma-4 status:Confirmed UniProt:Q2L6Y5 protein_id:CCD73314.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 189 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: dauer larval development [IGILink to PubMed article]
    positive regulation of cell size [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    positive regulation of organ growth [IMPLink to PubMed article]
    tail tip morphogenesis [IGILink to PubMed article][IMPLink to PubMed article]
    positive regulation of protein catabolic process [IMPLink to PubMed article]
    regulation of transcription, DNA-dependent [IEALink to PubMed article]
    positive regulation of multicellular organism growth [IGILink to PubMed article][IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPHGENEGR LCLGALSNVH RTEASEKARI HIGRGVELTA HADGNISITS NCKIFVRSGY  60
   61 LDYTHGSEYS SKAHRFTPNE SSFTVFDIRW AYMQMLRRSR SSNEAVRAQA AAVAGYAPMS 120
  121 VMPAIMPDSG VDRMRRDFCT IAISFVKAWG DVYQRKTIKE TPCWIEVTLH RPLQILDQLL 180
  181 KNSSQFGSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..189] PSI-BLAST 63.221849 Smad4 tumor suppressor C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.962970280214435 bayes_pls_golite062009
  • protein binding
    		•  0.56456434217804 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.74

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle