| Protein: | sma-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 189 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sma-4.
| Description | E-value | Query Range |
Subject Range |
|
|
245.0 | [0..1] | [188..473] |
|
Region A: Residues: [1-189] |
1 11 21 31 41 51
| | | | | |
1 MDPHGENEGR LCLGALSNVH RTEASEKARI HIGRGVELTA HADGNISITS NCKIFVRSGY 60
61 LDYTHGSEYS SKAHRFTPNE SSFTVFDIRW AYMQMLRRSR SSNEAVRAQA AAVAGYAPMS 120
121 VMPAIMPDSG VDRMRRDFCT IAISFVKAWG DVYQRKTIKE TPCWIEVTLH RPLQILDQLL 180
181 KNSSQFGSS
|
| Detection Method: |  |
| Confidence: | 63.221849 |
| Match: | 1mr1A |
| Description: | Smad4 tumor suppressor C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.962970280214435 | bayes_pls_golite062009 |
| protein binding | 0.56456434217804 | bayes_pls_golite062009 |
