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Protein Overview: gi|78708529, gi|...

General Information:
Name(s) found: gi|78708529 [NCBI NR]
gi|110289031 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|78708529|gb|ABB47504.1| Initiation factor 2 subunit family [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|110289031|gb|ABB47505.2| Initiation factor 2 subunit family protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 415 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDVQPLVSE FVLKLKRRKV EGSHAVARQT AELLRSVVSQ HRMGSTNQAA ALADAVRGVG  60
   61 EQLIAANPIE LAVGNIVRRV LHIIKEEDIS STAVGIEGLS VTAESDDEYD SGNDDHPTLS 120
  121 AAVLAAHARN ALRAPSLQTL LEDIPVSTAL SRSASSAGDS DGKSAGDKSS KSRKLKHDVI 180
  181 AAIGDLIDEI DTCYDQISEQ AVEHIHQNEV ILTLGRSRTV KEFLYAAKEK KRSFRVFVAE 240
  241 GAPRYKGHVL AKELVEKGVQ TTVITDSAVF AMISRVNMVI VGAHAIMANG GVIAPVGMNM 300
  301 VALAAQRHAV PFVVVAGSHK LCPLYPHNPE VLLNELKSPS DLLDFGEFSS CMNFSTQDGT 360
  361 PLLNVVNPTF DYVPPKLVSL FITDTGGHSP SYMYRLIAEY YSADDLVVRR KSTSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..415] PSI-BLAST 90.39794 X-ray crystal structure of aIF-2B alpha subunit-related translation initiation factor [Thermotoga maritima]

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • translation initiation factor activity
    		•  10.1099993541596 bayes_pls_golite062009
  • translation regulator activity
    		•  5.74669335554405 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.17718456512191 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.9283980201455 bayes_pls_golite062009
  • DNA binding
    		•  1.55389679363348 bayes_pls_golite062009
  • binding
    		•  1.53908996868286 bayes_pls_golite062009
  • catalytic activity
    		•  1.31732715713197 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  1.09424756417577 bayes_pls_golite062009
  • transcription factor activity
    		•  0.995059566132783 bayes_pls_golite062009
  • protein binding
    		•  0.0293610121675921 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.62

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle