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Protein Overview: gi|255670458, gi...

General Information:
Name(s) found: gi|77556989 [NCBI NR]
gi|255670458 [NCBI NR]
gi|215694815 [NCBI NR]
gi|108862923 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|77556989|gb|ABA99785.1| Pyridoxal kinase, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|255670458|dbj|BAF30224.2| Os12g0600400 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215694815|dbj|BAG90006.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108862923|gb|ABG22075.1| Pyridoxal kinase, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 309 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARPPVLSVA LPSDTGRVLS IQSHTVQGYV GNKSAVFPLQ LLGFDVDPIN SVQFSNHTGY  60
   61 PTFRGQVLNG SQLWDLIEGL AENDLLHYTH LLTGYIGSVS FLTTVLQVVD KLRSVNPDLV 120
  121 YVCDPVLGDE GKLYVPQDLI SVYQQKVVPV ATMLTPNQFE VELLTGLRIT CEEDGLKACN 180
  181 ALHSAGPRKV VITSALIEDK LLLIGSHKKA KEQPPEQFKI EIPKIPAYFT GTGDLTTALL 240
  241 LGWSNKYPDN LERAAELAVS SLQALLRRTV EDYKRAGFDP STSSLEIRLI QSQDEIRRPQ 300
  301 ITCKAVKYS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..309] PSI-BLAST 57.30103 Pyridoxal kinase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • kinase activity
    		•  3.96411195020495 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  3.67035256855428 bayes_pls_golite062009
  • transferase activity
    		•  3.30865420017814 bayes_pls_golite062009
  • lithium ion binding
    		•  3.00550221878163 bayes_pls_golite062009
  • sodium ion binding
    		•  2.93046843966773 bayes_pls_golite062009
  • pyridoxal kinase activity
    		•  2.62798458074822 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  2.56927916030784 bayes_pls_golite062009
  • phosphomethylpyrimidine kinase activity
    		•  2.12104666683074 bayes_pls_golite062009
  • pyridoxal binding
    		•  2.04719269680858 bayes_pls_golite062009
  • catalytic activity
    		•  1.74474587246986 bayes_pls_golite062009
  • binding
    		•  1.4216897826135 bayes_pls_golite062009
  • carbohydrate kinase activity
    		•  1.32862180479506 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.23363144435362 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.21529398967164 bayes_pls_golite062009
  • potassium ion binding
    		•  1.18018952731159 bayes_pls_golite062009
  • alkali metal ion binding
    		•  1.18018952731159 bayes_pls_golite062009
  • DNA binding
    		•  0.954497955488766 bayes_pls_golite062009
  • transcription factor activity
    		•  0.376784274163604 bayes_pls_golite062009
  • protein binding
    		•  0.117280046908929 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.45

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle