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Protein Overview: gi|77556856

General Information:
Name(s) found: gi|77556856 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|77556856|gb|ABA99652.1| Spotted leaf protein 11, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 575 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKFQGVILQ LEQALCDIPY NELDISDEVR EQVELVHAQL KRAKERIDMP DDEFYNDLLS  60
   61 VYDKNYDPSA ELAILGRLSE KLHLMTITDL TQESLALHEM VASGGGQDPG EHIERMSMLL 120
  121 KKIKDFVQTQ NPDMGPPMAS RVLDSNGDSR PITIPDEFRC PISLELMKDP VIVSTGQTYE 180
  181 RACIEKWIAS GHHTCPTTQQ KMSTSALTPN YVLRSLISQW CETNGMEPPK RSTQPNKPTP 240
  241 ACSSSERANI DALLSKLCSP DTEEQRSAAA ELRLLAKRNA NNRICIAEAG AIPLLLSLLS 300
  301 SSDLRTQEHA VTALLNLSIH EDNKASIISS GAVPSIVHVL KNGSMEAREN AAATLFSLSV 360
  361 IDEYKVTIGG MGAIPALVVL LGEGSQRGKK DAAAALFNLC IYQGNKGRAI RAGLVPLIMG 420
  421 LVTNPTGALM DEAMAILSIL SSHPEGKAAI GAAEPVPVLV EMIGSGTPRN RENAAAVMLH 480
  481 LCSGEHHLVH LARAQECGIM VPLRELALNG TDRGKRKAVQ LLERMSRFLV QQQEEQESQS 540
  541 QASAQVPPQA TPEQVPENDI PEQLDSPASQ YPMVV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..148] PSI-BLAST 4.0 Tumor suppressor gene product Apc
    2 View Details [149..226] PSI-BLAST 9.09691 NMR solution structure of the U box domain from AtPUB14, an armadillo repeat containing protein from Arabidopsis thaliana
    3 View Details [227..483] FFAS03 4.15 No description for 2gl7A was found.
    4 View Details [484..575] PSI-BLAST 58.0 Mouse Importin alpha- phosphorylated SV40 CN peptide complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.0938889867773109 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.67

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle