| Protein: | gi|77556856 |
| Organism: | Oryza sativa Japonica Group |
| Length: | 575 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|77556856.
| Description | E-value | Query Range |
Subject Range |
|
|
311.0 | [0..1] | [575..120] |
|
Region A: Residues: [1-148] |
1 11 21 31 41 51
| | | | | |
1 MKKFQGVILQ LEQALCDIPY NELDISDEVR EQVELVHAQL KRAKERIDMP DDEFYNDLLS 60
61 VYDKNYDPSA ELAILGRLSE KLHLMTITDL TQESLALHEM VASGGGQDPG EHIERMSMLL 120
121 KKIKDFVQTQ NPDMGPPMAS RVLDSNGD
|
| Detection Method: |  |
| Confidence: | 4.0 |
| Match: | 1m5iA |
| Description: | Tumor suppressor gene product Apc |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [149-226] |
1 11 21 31 41 51
| | | | | |
1 SRPITIPDEF RCPISLELMK DPVIVSTGQT YERACIEKWI ASGHHTCPTT QQKMSTSALT 60
61 PNYVLRSLIS QWCETNGM
|
| Detection Method: | |
| Confidence: | 9.09691 |
| Match: | 1t1hA |
| Description: | NMR solution structure of the U box domain from AtPUB14, an armadillo repeat containing protein from Arabidopsis thaliana |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0938889867773109 | bayes_pls_golite062009 |
|
Region A: Residues: [227-483] |
1 11 21 31 41 51
| | | | | |
1 EPPKRSTQPN KPTPACSSSE RANIDALLSK LCSPDTEEQR SAAAELRLLA KRNANNRICI 60
61 AEAGAIPLLL SLLSSSDLRT QEHAVTALLN LSIHEDNKAS IISSGAVPSI VHVLKNGSME 120
121 ARENAAATLF SLSVIDEYKV TIGGMGAIPA LVVLLGEGSQ RGKKDAAAAL FNLCIYQGNK 180
181 GRAIRAGLVP LIMGLVTNPT GALMDEAMAI LSILSSHPEG KAAIGAAEPV PVLVEMIGSG 240
241 TPRNRENAAA VMLHLCS
|
| Detection Method: | |
| Confidence: | 4.15 |
| Match: | 2gl7A |
| Description: | No description for 2gl7A was found. |
|
Region A: Residues: [484-575] |
1 11 21 31 41 51
| | | | | |
1 GEHHLVHLAR AQECGIMVPL RELALNGTDR GKRKAVQLLE RMSRFLVQQQ EEQESQSQAS 60
61 AQVPPQATPE QVPENDIPEQ LDSPASQYPM VV
|
| Detection Method: | |
| Confidence: | 58.0 |
| Match: | 1q1sC |
| Description: | Mouse Importin alpha- phosphorylated SV40 CN peptide complex |
Matching Structure (courtesy of the PDB): |
|
