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Protein Overview: gi|115489272, gi...

General Information:
Name(s) found: gi|77556274 [NCBI NR]
gi|215694545 [NCBI NR]
gi|125579848 [NCBI NR]
gi|115489272 [NCBI NR]
gi|113649630 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|77556274|gb|ABA99070.1| Glycosyl transferase family 8 protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|215694545|dbj|BAG89538.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|125579848|gb|EAZ20994.1| hypothetical protein OsJ_36645 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115489272|ref|NP_001067123.1| Os12g0578500 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113649630|dbj|BAF30142.1| Os12g0578500 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 554 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIRLSPSMR SITISSSGIG IGGGNGGGGG GGGGVGSGLL DLMKLKAAAR HFSYRTVFHT  60
   61 VLILAFLLPF VFILTALVTL EGFNKCSSLD CLGRRLGPRL LGRGNDGSMR VMRDLYRMLD 120
  121 EINSEEVPVD LKVPDSFDEF IWDMKNNDYD LRSFAFRLKA TMESMDRELR TSRLSEQLNK 180
  181 HYAAIAIPKG LHCLSLRLTD EYSSNALARK QLPPPELIPR LSDNSYLHFV LASDNILAAS 240
  241 VVVSSTIRSS LKPGRIVFHV ITDKKTYPAM HSWFALNTLS PAIVEVKGVH QFDWLTRENV 300
  301 PVLEAIETQH TVRSRFHGNH LARNSAGDSP RVFAAKLQAG SPTYTSVLNH IRIYLPELFP 360
  361 NLNKVVFLDD DVVVQRDLSS LWDIDLGGKV NGAVETCRGG DTWVMSKRFR NYFNFSHPLI 420
  421 ANNFDPSECA WAYGMNIFDL SAWRKTSIKD KYHHWVRENL SSNFTLWRLG TLPPGLIAFR 480
  481 GHVHPIDPSW HLLGLGYQEK TDIPSVQKAA VIHYNGQSKP WLDIGFKHLQ PFWTRHVNYS 540
  541 NEFIRNCHIM EPQL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..212] deduced N/A No confident structure predictions are available.
    2 View Details [213..263] MSA 1.090996 View MSA. No confident structure predictions are available.
    3 View Details [264..554] PSI-BLAST 36.30103 Crystal Structural Analysis of Active Site Mutant Q189E of LgtC

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  1.3567084433464 bayes_pls_golite062009
  • transferase activity
    		•  1.04375515050786 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle